bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-31_CDS_annotation_glimmer3.pl_2_1 Length=174 Score E Sequences producing significant alignments: (Bits) Value 484018.BACPLE_00804 144 2e-37 > 484018.BACPLE_00804 Length=613 Score = 144 bits (362), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/183 (42%), Positives = 103/183 (56%), Gaps = 9/183 (5%) Query 1 MTYNTGSKYCIIMCIYHAIPLLDYAISGQDGQLLVTNIEDLPIPEFDNIGMEAVPVVQLV 60 + +N G +Y I+MC++H +P LDY S +TN+ D PIPEFD IGME VPV++ + Sbjct 431 INFNVGGQYGIVMCVFHVLPQLDYITSAPHFGTTLTNVLDFPIPEFDKIGMEQVPVIRGL 490 Query 61 NSSLLSTNIGKYS---FFGYNPRYYNWKTKIDRVHGAFTTDLKDWVAPIDDSYLQQWLPL 117 N K S +FGY P+YYNWKT +D+ G F LK W+ P DD L + Sbjct 491 NPVKPKDGDFKVSPNLYFGYAPQYYNWKTTLDKSMGEFRRSLKTWIIPFDDEALLAADSV 550 Query 118 ------TSSQPSLLYPFFKVNPNTLDTIFAVKADSTWATDQLLVNCNIDCKVVRPLSQDG 171 S+ FFKV+P+ LD +FAVKA+S TDQ L + D VVR L +G Sbjct 551 DFPDNPNVEADSVKAGFFKVSPSVLDNLFAVKANSDLNTDQFLCSTLFDVNVVRSLDPNG 610 Query 172 IPY 174 +PY Sbjct 611 LPY 613 Lambda K H a alpha 0.321 0.139 0.439 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 143714426400