bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-30_CDS_annotation_glimmer3.pl_2_1

Length=544
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   146   4e-35


> 483216.BACEGG_02721
Length=578

 Score =   146 bits (368),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 148/610 (24%), Positives = 242/610 (40%), Gaps = 115/610 (19%)

Query  3    RPRRNAFNLSYESKLTLNMGELVPIMCMPVVPGDKFRVKTESLVRLAPLVAPMMHRVNVF  62
            +P RN F+LS++   T   GEL+P+M   V+PGD F++  ++  R  P+      R+  +
Sbjct  13   KPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQPVNTAAFARIREY  72

Query  63   THYFFVPNRLVWNEWEDFITKGVDGE----------------DMPMFPKIQINQDSHLVS  106
              +FFVP  L+WN+    +T+  D                  +MP      I    + +S
Sbjct  73   YDFFFVPYDLLWNKANTVLTQMYDNPQHAVSIDPTRNFVLSGEMPYMTSEAIASYINALS  132

Query  107  SASLIKE----YFG------DSSLWDYLGLPTLSACGNKSYDVVNGVKVPSGFQVSALPF  156
            +AS + +    YFG         L +YLG     +     +   N   + +    +    
Sbjct  133  TASALADYKSNYFGYNRSKSSVKLLEYLGYGNYESFLTDDW---NTAPLMANLNHNIFGL  189

Query  157  RAYQLIYNEYYRDQNL------TEPIDFTLGSGTTVGGD------QLMALMSLRRRAWEK  204
             AYQ IY+++YRD         T  +D+  GS   +         Q      LR   W+K
Sbjct  190  LAYQKIYSDFYRDSQWERVSPSTFNVDYLDGSSMNLDNAYSTEFYQNYNFFDLRYCNWQK  249

Query  205  DYFTSALPWLQRGPEVTVPVQGAGGSMDVVYERQSDSQKWVDSSGREFENGRAYDITMTR  264
            D F   LP  Q G      +                     D +G+         +T++ 
Sbjct  250  DLFHGVLPHQQYGETAVASITP-------------------DVTGK---------LTLSN  281

Query  265  ANDPNSALMVAVNGGTNNRAPELDPNGTLKVNVDEMGININDLRTSNALQRWFERNARGG  324
             +   ++   A    T N  P  D  G L + V         LR +  LQ+W E    G 
Sbjct  282  FSTVGTSPTTASGTATKN-LPAFDTVGDLSILV---------LRQAEFLQKWKEITQSGN  331

Query  325  SRYIEQILSHFGVRSSDARLQRPQFLGGGRMPISVSEVLQTSSTDETSPQANMAGHGISA  384
              Y +Q+  H+GV   D   +   +LGG    I ++EV+ T+ T   S  A++AG G+  
Sbjct  332  KDYKDQLEKHWGVSVGDGFSELCTYLGGVSSSIDINEVINTNITG--SAAADIAGKGV--  387

Query  385  GINNGFKHYFE--EHGYIIGIMSITPRSGYQQG-VPRDFTKFDNMDFYFPEFAHLSEQEI  441
            G+ NG  ++     +G I+ I    P   Y    +   F K ++ D+  PEF  +  Q +
Sbjct  388  GVANGEINFNSNGRYGLIMCIYHCLPLLDYTTDMLDPAFLKVNSTDYAIPEFDRVGMQSM  447

Query  442  KNQELF--VSEDAAYNNGTFGYTPRYAEYKYHPSEAHGDFRSNLSFWHLN----------  489
               +L   +   A  +    GY PRY +YK    ++ G F+  L+ W ++          
Sbjct  448  PLVQLMNPLRSFANASGLVLGYVPRYIDYKTSVDQSVGGFKRTLNSWVISYGNISVLKQV  507

Query  490  RIFEDKP------------NLNTTFVECRPS--NRVFATSETED---DKFWVQMYQDVKA  532
             +  D P             +N TF +  P   + +FA    +D   D+F    + D+KA
Sbjct  508  TLPNDAPPIEPSEPVPSVAPMNFTFFKVNPDCLDPIFAVQAGDDTNTDQFLCSSFFDIKA  567

Query  533  LRLMPKYGTP  542
            +R +   G P
Sbjct  568  VRNLDTDGLP  577



Lambda      K        H        a         alpha
   0.319    0.135    0.412    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1179302530560