bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-29_CDS_annotation_glimmer3.pl_2_1

Length=325
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              78.2    2e-13


> 585502.HMPREF0645_1835
Length=553

 Score = 78.2 bits (191),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 62/203 (31%), Positives = 95/203 (47%), Gaps = 28/203 (14%)

Query  55   SAVTPINLWAVNDGSVSSATINQLRLAFQVQKLYERDARGGTRYIEVLKSHFGVTSPDAR  114
            S  T +N     D S    +++ LR AF V KL     R G  + + +++H+GV  PD+R
Sbjct  278  SNFTRVNFGVDTDSSEGDFSVSSLRAAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSR  337

Query  115  LQRPEYLGGNRIPIVISEINQTSGTSANS-----------TPQGNPSGQSRTTDVHSDFK  163
              R  YLGG    + +S++ QTSGT+A               +G  SG+ R   +  D K
Sbjct  338  DGRVNYLGGFDSDMQVSDVTQTSGTTATEYKPEAGYLGRVAGKGTGSGRGR---IVFDAK  394

Query  164  KSFVEHGFIIGVMVA----RYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIY  219
                EHG ++ +       +YD T    L+    +  R DY+ P F N+G Q  LN    
Sbjct  395  ----EHGVLMCIYSLVPQIQYDCT---RLDPMVDKLDRFDYFTPEFENLGMQP-LNSSYI  446

Query  220  AQGNGTD--DEVFGYQEAWADYR  240
            +    TD  + V GYQ  +++Y+
Sbjct  447  SSFCTTDPKNPVLGYQPRYSEYK  469



Lambda      K        H        a         alpha
   0.315    0.132    0.402    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 566351143320