bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-28_CDS_annotation_glimmer3.pl_2_1

Length=162
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  525263.HMPREF0298_0889                                              38.5    0.37


> 525263.HMPREF0298_0889
Length=1116

 Score = 38.5 bits (88),  Expect = 0.37, Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (52%), Gaps = 3/91 (3%)

Query  38   LVEKGEENLYEYIQSYKDSVDINTLLRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNA  97
            + ++G  +L    QS K   D+N L+R +   +P+  +  + A G+FT L + Y+ +++A
Sbjct  197  ITDEGALDLLHRTQSAKTLGDLNHLMRTFMLPEPETFAIAEQAAGNFTDLHTAYSSVVDA  256

Query  98   VNDGKQYFESLPVDVRAQFNHSFSEFMASMD  128
                +Q    LPV V A+     +  + ++D
Sbjct  257  ---REQIEHLLPVRVAAEKRSDVATELLTVD  284



Lambda      K        H        a         alpha
   0.317    0.134    0.398    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128033376900