bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-27_CDS_annotation_glimmer3.pl_2_2 Length=107 Score E Sequences producing significant alignments: (Bits) Value 1071381.XP_003687623.1 33.5 5.1 > 1071381.XP_003687623.1 Length=424 Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust. Identities = 23/68 (34%), Positives = 35/68 (51%), Gaps = 5/68 (7%) Query 30 IINGEANNMEDGVFPTIYTEKKDGVQPEFD-IRTDRFEIAIDAMDKINQSAASQIAKSSG 88 +++ E N GVF T Y + KD P+ D I + FE+ + K N S AS+IA S Sbjct 240 VMSAEGNLYNPGVFNTDYIDDKDKTFPKVDKIAREYFEV----IKKCNGSHASRIAMKSH 295 Query 89 ETEAVKDF 96 + ++ F Sbjct 296 MFKILRPF 303 Lambda K H a alpha 0.308 0.127 0.348 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127901841280