bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-26_CDS_annotation_glimmer3.pl_2_3

Length=334
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              76.6    1e-12


> 585502.HMPREF0645_1835
Length=553

 Score = 76.6 bits (187),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 16/229 (7%)

Query  83   TINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPVNINQV  142
            +++ LR AF + KL     R G  + + +++H+GV  PD+R  R  YLGG    + ++ V
Sbjct  297  SVSSLRAAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDMQVSDV  356

Query  143  VQSSATQSS-----GTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVA----RYDHTY  193
             Q+S T ++        LG  A    T    G  +    EHG ++ I       +YD T 
Sbjct  357  TQTSGTTATEYKPEAGYLGRVAG-KGTGSGRGRIVFDAKEHGVLMCIYSLVPQIQYDCTR  415

Query  194  QQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQ-DNEVFGYQEAWADYRYKP  252
               L+    + DR DY+ P F N+G QP+ +  I +  T    N V GYQ  +++Y+   
Sbjct  416  ---LDPMVDKLDRFDYFTPEFENLGMQPLNSSYISSFCTTDPKNPVLGYQPRYSEYKTAL  472

Query  253  SRVAGEM-RSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAV  300
                G+  +S A +S  V      +T  P+L  A  + D   ++ +  V
Sbjct  473  DVNHGQFAQSDALSSWSVSRFR-RWTTFPQLEIADFKIDPGCLNSIFPV  520



Lambda      K        H        a         alpha
   0.318    0.133    0.404    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 587824479460