bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-25_CDS_annotation_glimmer3.pl_2_2 Length=76 Score E Sequences producing significant alignments: (Bits) Value 370354.XP_001738035.1 39.3 0.046 > 370354.XP_001738035.1 Length=546 Score = 39.3 bits (90), Expect = 0.046, Method: Composition-based stats. Identities = 19/64 (30%), Positives = 32/64 (50%), Gaps = 5/64 (8%) Query 11 HWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMCTRPMPMYSIP 70 HW + DHY K+PT WI+E ++ L + + +C ++ N+ T MP +P Sbjct 56 HWMITDHYRKLPT---EWIKEYYEPLEHYLKSHPEHSKEVYC--YMMNITTDIMPSIILP 110 Query 71 GSLD 74 +D Sbjct 111 SKID 114 Lambda K H a alpha 0.323 0.134 0.466 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127989974020