bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-22_CDS_annotation_glimmer3.pl_2_1 Length=290 Score E Sequences producing significant alignments: (Bits) Value 59729.ENSTGUP00000009923 37.4 3.9 > 59729.ENSTGUP00000009923 Length=2788 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 40/170 (24%), Positives = 76/170 (45%), Gaps = 16/170 (9%) Query 84 QEAAMQGKYNSQSMLKQMGYNTLQAIMQGVYNHIENSVAMNYNSAEALANREWQEHMSST 143 ++ A++ K ++ML + + Q I++ + ++ + SVA + +A+ AN++ +E +T Sbjct 1277 EQLAIRFKTPEEAMLFKKKFEEAQNILKSLGSNADTSVAQSSGTAKETANQDIKESNRTT 1336 Query 144 AYQRAVEDMKKAGLNPILAFANGGASTPGGSAGTISGASMGLASSSALG-----LSRSGG 198 + +N F G S+ S GT++ S +++ + G SGG Sbjct 1337 S----------GTMNLGFQFLKDGTSSERDSKGTLTATSTASSTTISFGKDAQQACSSGG 1386 Query 199 FVPNAYESDSWSKSDWYN-ASQSWQQMLSTTHMTPYGLAKTLTNIGNNTE 247 F + + D W W A QS + TH TP + +L GN + Sbjct 1387 FGQHLLKKDQWECKVWNCVACQSPNPSMWETHGTPLTGSASLKASGNTVQ 1436 Lambda K H a alpha 0.306 0.122 0.347 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 465085670800