bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-21_CDS_annotation_glimmer3.pl_2_1

Length=639
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_0935                                              48.9    0.003


> 585502.HMPREF0645_0935
Length=519

 Score = 48.9 bits (115),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 51/222 (23%), Positives = 81/222 (36%), Gaps = 25/222 (11%)

Query  352  YVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGAKSSAPYVNKPDFLGVWQASVNPS  411
            Y +V  LR    +   +     +G    D  R  +G +       + ++LG + + +  S
Sbjct  261  YFSVSSLRSAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDLQVS  320

Query  412  NVRAMANGSASGEDANLGQLAACIDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYH-  470
            +V   +  +A+      G L     +    SG   I + AKE G  M I  LVP+  Y  
Sbjct  321  DVTQTSGTTATEYKPEAGYLGRIAGKGTG-SGRGRIVFDAKEHGVLMCIYSLVPQIQYDC  379

Query  471  QGLHPDLASVSFGDDFNPELNGIGFQSVPRHRFTMMPRGLDDITAHQEKNPWLGYAGTGV  530
              L P +  +   D F PE   +G Q +                          Y  +  
Sbjct  380  TRLDPMVDKLDRFDFFTPEFENLGMQPLNS-----------------------SYISSFC  416

Query  531  TIDPNMASVGEEVAWSWLRTDYPRLHGDFAQNGNYQYWVLAR  572
            T DP    +G +  +S  +T     HG FAQN     W ++R
Sbjct  417  TPDPKNPVLGYQPRYSEYKTALDINHGQFAQNDALSSWSVSR  458



Lambda      K        H        a         alpha
   0.321    0.139    0.439    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1449799565630