bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-19_CDS_annotation_glimmer3.pl_2_4 Length=400 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01608 135 2e-32 > 469590.BSCG_01608 Length=497 Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 110/367 (30%), Positives = 163/367 (44%), Gaps = 53/367 (14%) Query 1 MINNRSKAYGSCLHPRVIKNKYTGDPVYVPCGTCEFCIHNKAIKAELKCNVQLAASKYCE 60 M+ N + CLHP+ I N YT + + VPCG C+ C K + +C+++ +K+ Sbjct 1 MVQN---PFCKCLHPKRIMNPYTKESMVVPCGHCQACTLAKNSRYAFQCDLESYTAKHTL 57 Query 61 FITLTYSTEYLPVGEFYKGASGEVRFRCLPRDFVYSYKTVQGYNRNISFNDEYFDFDTQL 120 FITLTY+ ++P F S E + C + D +T Sbjct 58 FITLTYANRFIPRAMFVD--SIERPYGC-----------------------DLIDKETGE 92 Query 121 SWESAQLLQKKTHLHYTSFPDGRRIYNRPYMENLIGYLNYRDMQLFFKRLNQNI-RSVTN 179 A L + + + N+ Y+ + YL D+QLF KRL + + + Sbjct 93 ILGPADLTED----------ERTNLLNKFYLFGDVPYLRKTDLQLFLKRLRYYVTKQKPS 142 Query 180 EKIYYYVVGEYGPTTFRPHFHILLFHDSKELRQSIRQFVSKSWRFGDTDTQPVWSSASCY 239 EK+ Y+ VGEYGP FRPH+H+LLF S E Q + +SK+W FG D Q S Y Sbjct 143 EKVRYFAVGEYGPVHFRPHYHLLLFLQSDEALQICSENISKAWTFGRVDCQVSKGQCSNY 202 Query 240 VAGYVNSTACLPDFYKNFSHIKPFGRFSMHFAESAFNEVFKPQEDEEIFSLFYDGRM--- 296 VA YVNS+ +P +K S + PF S + F + E+I+SL + + Sbjct 203 VASYVNSSCTIPKVFKA-SSVCPFSVHSQKLGQG-----FLDCQREKIYSLTPENFIRSS 256 Query 297 LELNGKPTLVRPKRSHINRLYPRLNKSKHASVDDDIRVATALSNIPHVLAKFGFIDEVTD 356 + LNGK RS + YPR S + A S + A+ F D T Sbjct 257 IVLNGKYKEFDVWRSCYSFFYPRCKGFVTKSSRE-----RAYSYSIYDTARLLFPDAKTT 311 Query 357 FEMSKRI 363 F ++K I Sbjct 312 FSLAKEI 318 Lambda K H a alpha 0.325 0.140 0.435 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 774070183740