bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-19_CDS_annotation_glimmer3.pl_2_2 Length=167 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01610 50.8 5e-06 > 469590.BSCG_01610 Length=154 Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/95 (33%), Positives = 51/95 (54%), Gaps = 6/95 (6%) Query 40 LREQSPVEDFLFED---NFDGSRTFVSDYSVLSGQAAIDQMNPTQLRRYLNGL---RPSS 93 RE+SPV+ FLF++ + D S SD +L Q +D+++ T L Y N + P Sbjct 29 FREESPVDQFLFQEVSVDGDTSIRLSSDIYMLFNQQRLDKLSQTSLLEYFNNISVTEPRF 88 Query 94 SPYTHRYNDDFLLEYCKDRNIQSYTEMQAWLEHLI 128 + + D+ L+ + K R IQS +E+ AW +L+ Sbjct 89 NELRSKLGDEQLISFVKSRFIQSKSELMAWSNYLM 123 Lambda K H a alpha 0.315 0.128 0.365 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 125132648550