bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-17_CDS_annotation_glimmer3.pl_2_3

Length=332
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  910310.HMPREF9402_0015                                              47.4    0.002


> 910310.HMPREF9402_0015
Length=309

 Score = 47.4 bits (111),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (50%), Gaps = 9/145 (6%)

Query  102  LERIRKKTG-KSIKHWFITELGHEKTERLHLHGIV-WGIGTDQLIKEKWNYGITY--TGN  157
            + R+RKK G ++ K+ ++ E G   TER HLH I+  G+  D+ I+EKW  G T   T N
Sbjct  134  INRLRKKKGLENAKYVYVIEEGTFGTERFHLHLIIDNGLSKDE-IEEKWGLGATTLRTLN  192

Query  158  FVNEKTINYITKYMTKIDEDHPEFVGKVLCSK--GIGAGYIKRADASKH--KYEKGKTIE  213
            +  E+    + KYM K +E +     ++   +  G   G +K   ASK+  K  K K +E
Sbjct  193  YYKEENFIGVCKYMMKDEETYKRTAFRLKGKRRWGSSKGNLKVPKASKNRTKMSKKKVME  252

Query  214  TYRLRNGAKINLPIYYRNKLFTEEE  238
                ++G    L   Y N  F E E
Sbjct  253  MVLHQDGIGEKLEREYFNHQFKEVE  277



Lambda      K        H        a         alpha
   0.317    0.136    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 581764433280