bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-14_CDS_annotation_glimmer3.pl_2_6 Length=136 Score E Sequences producing significant alignments: (Bits) Value 483216.BACEGG_02722 59.3 4e-09 > 483216.BACEGG_02722 Length=155 Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 59/106 (56%), Gaps = 6/106 (6%) Query 1 VTSEMLAQGVLPEPNPVGDFLFDH-NADG--SVTFCSDYGILFGQKAIDNMNQTQLRRYM 57 V S +L+ EP+P+ +F+F DG S+ SD +LF Q+ +D + ++QL Y Sbjct 20 VNSAVLSGSEFVEPSPLHEFMFQEIECDGKKSIRITSDIYMLFNQQRLDKLTRSQLVEYF 79 Query 58 NSLV---PRSSNYTRNYNDDFLLDYCKDRNIQSATEMASWLDHLLS 100 ++L P+ S+ + D+ L + K R IQ+ +E+ +W +L+S Sbjct 80 DNLSVSEPKMSDLRKKMTDEQLCSFVKSRFIQTPSELMAWSQYLMS 125 Lambda K H a alpha 0.312 0.126 0.357 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 126355906600