bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-13_CDS_annotation_glimmer3.pl_2_9 Length=97 Score E Sequences producing significant alignments: (Bits) Value 5059.CADAFLAP00001862 34.3 2.8 > 5059.CADAFLAP00001862 Length=1270 Score = 34.3 bits (77), Expect = 2.8, Method: Composition-based stats. Identities = 23/83 (28%), Positives = 38/83 (46%), Gaps = 4/83 (5%) Query 7 RVKDLFQIIRTTTHEEQEEYVIVIGKHLATEARFSTREEAEQFIESKDYDLIWALIAALI 66 RV D Q++ T T E + + A T + D A+IAA+I Sbjct 883 RVDDTAQVVTTETSSEHFDNNVTENSGEGAAASLETSHPENDIPNGAEND---AVIAAII 939 Query 67 DAKDVQEMEAQQEKDVQKVENVI 89 A+D+Q+ME +Q D+ ++ V+ Sbjct 940 -AEDIQQMETEQSTDIPQINEVM 961 Lambda K H a alpha 0.315 0.129 0.341 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 128055181610