bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-11_CDS_annotation_glimmer3.pl_2_6 Length=463 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01609 243 2e-70 > 469590.BSCG_01609 Length=580 Score = 243 bits (621), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 168/482 (35%), Positives = 237/482 (49%), Gaps = 46/482 (10%) Query 1 MSDFNPLNRARISTHRSSFDLSSKKLFTAKVGEILPCYWQIAIPGNKYRISSDWFTRTVP 60 M++ L R T R+ FDLSSK+ FTAK GE+LP +PG+K+ I FTRT P Sbjct 1 MANIMSLKSLRNKTSRNGFDLSSKRNFTAKPGELLPVKCWEVLPGDKWSIDLKSFTRTQP 60 Query 61 VNTAAYTRIKEYYDFYAVPLRLISRALPQAFTQMTDYITSAAS--STANSSTLTSVPFVS 118 +NTAA+ R++EYYDFY VP L+ TQM D A S +AN + +P V+ Sbjct 61 LNTAAFARMREYYDFYFVPYNLLWNKANTVLTQMYDNPQHATSYIPSANQALAGVMPNVT 120 Query 119 QTIFNAFFQTANAGDQPNT----RDDAGLPIVYGSCKLLDMLGYGSMIASNNPSKAAITK 174 + A D T ++ G G+ KLL+ LGYG+ TK Sbjct 121 CKGIADYLNLV-APDVTTTNSYEKNYFGYSRSLGTAKLLEYLGYGNFYTYATSKNNTWTK 179 Query 175 KYLGVDSLNDADNPLVYQTSQTVNALPFLAYQKIYYDFFSNSQWEKHKAYAYNVDYWSGA 234 +PL ++ +N LAYQKIY D +SQWEK +NVDY SG Sbjct 180 ------------SPL--SSNLQLNIYGVLAYQKIYADHIRDSQWEKVSPSCFNVDYLSGT 225 Query 235 GNIGLVTD-------------MVQLRYANYPKDYFMGMLPSSQYGSVAVLPSISSSSDSR 281 + + D M LRY N+ KD F G+LP QYG A + S+ S Sbjct 226 VDSAMTIDSMITGQGFAPFYNMFDLRYCNWQKDLFHGVLPRQQYGDTAAVNVNLSNVLSA 285 Query 282 SLLYYEPSSSATAALQSAGGSSSSVRLSQTVSSSQGIRLNSDLSALSIRATEYLQRWKEI 341 + P + SS+ V L QTV+ S + L++R E+LQ+WKEI Sbjct 286 QYMVQTPDGDPVGG---SPFSSTGVNL-QTVNGS------GTFTVLALRQAEFLQKWKEI 335 Query 342 VQFSSKDYSDQMAAQFGIKAPEYMGNHSHYIGGWSSVININEVVNTNLDADSSQASIAGK 401 Q +KDY DQ+ + + E S Y+GG ++ ++INEVVN N+ S+ A IAGK Sbjct 336 TQSGNKDYKDQIEKHWNVSVGEAYSEMSLYLGGTTASLDINEVVNNNITG-SNAADIAGK 394 Query 402 GISSNSGHTLTYDCGAEHQIIMCVYHAVPMLDWNLTGQAPQLTVTAISDFPQPAFDHSAP 461 G+ +G +++D G + +IMC+YH++P+LD+ P T +DF P FD Sbjct 395 GVVVGNGR-ISFDAGERYGLIMCIYHSLPLLDYTTDLVNPAFTKINSTDFAIPEFDRVGM 453 Query 462 QS 463 +S Sbjct 454 ES 455 Lambda K H a alpha 0.315 0.128 0.376 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 955326880000