bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_4

Length=68
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|496050826|ref|WP_008775333.1|  predicted protein                   32.3    4.9


>gi|496050826|ref|WP_008775333.1| predicted protein [Bacteroides sp. 2_2_4]
 gi|229448890|gb|EEO54681.1| hypothetical protein BSCG_01606 [Bacteroides sp. 2_2_4]
Length=69

 Score = 32.3 bits (72),  Expect = 4.9, Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 0/38 (0%)

Query  1   MRITPQQWIEIVKLISTFIIGVITTLFVQSCTISMSVS  38
           M++T  QW  I++ I T ++ +   + V SC ++MS+S
Sbjct  1   MKLTSDQWNRIIQAIVTAVVTICNIILVSSCAVTMSMS  38



Lambda      K        H        a         alpha
   0.326    0.136    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 436879875012