bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-20_CDS_annotation_glimmer3.pl_2_3

Length=94
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|547876971|ref|WP_022282557.1|  putative uncharacterized protein    35.8    2.6
gi|516121795|ref|WP_017552375.1|  hypothetical protein                33.1    9.9


>gi|547876971|ref|WP_022282557.1| putative uncharacterized protein [Clostridium sp. CAG:448]
 gi|524525422|emb|CDC62619.1| putative uncharacterized protein [Clostridium sp. CAG:448]
Length=1235

 Score = 35.8 bits (81),  Expect = 2.6, Method: Composition-based stats.
 Identities = 21/76 (28%), Positives = 42/76 (55%), Gaps = 6/76 (8%)

Query  6    YFRNGEDLKKKACELIDKCIDFKVEGDCIIIEKP-NNVRITCKVENGIKMKEIYIDGFLM  64
            Y   G  L K+A + + + I F++E DC++I++P  N+ +   +E+  K++      F +
Sbjct  418  YLAAGVRLSKQAAKTVHRGIWFRIEKDCVVIKEPETNIAVRVPLESTDKVRN-----FRI  472

Query  65   QDVVEKVYRTVNIEEL  80
            +D VE +    + +EL
Sbjct  473  EDRVECIVLFCDDKEL  488


>gi|516121795|ref|WP_017552375.1| hypothetical protein [Bacillus coagulans]
Length=112

 Score = 33.1 bits (74),  Expect = 9.9, Method: Compositional matrix adjust.
 Identities = 23/66 (35%), Positives = 35/66 (53%), Gaps = 7/66 (11%)

Query  25   IDFKVEGDCIIIEKPNNVRITCKVENGIKMKEIYIDGFLMQDVVEKVYRTVNIEELFGEP  84
            IDF V    I++ K    ++  +VE G  +  IY +   ++DV EK+Y  + I + F EP
Sbjct  51   IDFAV---GIVLRK----KVGDRVEAGEPLSTIYANREAVEDVKEKIYDNITISDHFEEP  103

Query  85   CRIMKI  90
              I KI
Sbjct  104  KLIHKI  109



Lambda      K        H        a         alpha
   0.324    0.144    0.425    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 432797507010