bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_4
Length=156
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 50.1 2e-10
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 42.4 3e-07
Gokush_Human_feces_E_017_Microviridae_AG0129_hypothetical.protein 30.4 0.004
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 26.9 0.017
Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein 28.1 0.020
Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.... 25.4 0.076
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 25.0 0.11
Gokush_Human_feces_A_019_Microviridae_AG0440_hypothetical.protein 26.2 0.11
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 24.6 0.13
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 25.8 0.14
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 50.1 bits (118), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query 41 DSDGVLHVLNDISLLFNQQRLENRLSSTELREMFNRYSPNKSRYLAQldddtllstlKSR 100
D DGV+ ++D++LL N +RL N++ + P KS Y + D+ L + +KSR
Sbjct 41 DDDGVIRYVSDVNLLMNAERLRNQIGEESYLNLIRGIQPKKSPYDNKYTDEQLFTAIKSR 100
Query 101 HIQSLSEIKSWTEYCIENFDSLLKAQQAKENEIDDIQETV 140
IQ+ SE+ +W E SL A + +E+D + E+V
Sbjct 101 FIQTPSEVLAWIE-------SLGSAGDSIRSELDALTESV 133
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 42.4 bits (98), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (32%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query 41 DSDGVLHVLNDISLLFNQQRLENRLSSTELREMFNRYSPNKSRYLAQldddtllstlKSR 100
++DG + +D +LF Q+ ++N ++ +LR N P S Y +DD LL K R
Sbjct 94 NADGSVTFCSDYGILFGQKAIDN-MNQVQLRRYMNSLVPRSSNYTRNYNDDFLLDYCKDR 152
Query 101 HIQSLSEIKSWTEYCIENFDSLLKAQQAKENEI----DDIQETVDEP 143
+IQS +E+ SW D LL Q+ E+++ D + +V EP
Sbjct 153 NIQSATEMASW-------LDHLLSEGQSLESDLQAYADSLSASVVEP 192
> Gokush_Human_feces_E_017_Microviridae_AG0129_hypothetical.protein
Length=161
Score = 30.4 bits (67), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (29%), Positives = 45/84 (54%), Gaps = 11/84 (13%)
Query 3 RKVKKERYSSRLSYNYDYDSKKSKFVVR----DKLAVLSSYADSDGVLHVLN----DISL 54
RK + +RL++ + YD K +K +V+ D+ A + SY + + +++N D S+
Sbjct 13 RKETEAGRKTRLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAFDPSI 72
Query 55 LFNQQRLENRLSSTELREMFNRYS 78
+ Q+L +LS TE ++ N S
Sbjct 73 V---QKLGAQLSDTEPQDFTNMPS 93
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 26.9 bits (58), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (74%), Gaps = 0/23 (0%)
Query 98 KSRHIQSLSEIKSWTEYCIENFD 120
KSR++QS SE+++W E ++ D
Sbjct 5 KSRYLQSPSEVRAWLETLVDKAD 27
> Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein
Length=157
Score = 28.1 bits (61), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query 3 RKVKKERYSSRLSYNYDYDSKKSKFVVR----DKLAVLSSYADSDGVLHVLN----DISL 54
RK + +RL++ + YD K +K +V+ D+ A + SY + + +++N D S+
Sbjct 13 RKETEAGRKTRLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAYDPSI 72
Query 55 LFNQQRLENRLSSTELREMFNRYS 78
+ Q+L +LS E ++ N S
Sbjct 73 V---QKLGAQLSDAEPQDFTNMPS 93
> Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.protein
Length=62
Score = 25.4 bits (54), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 98 KSRHIQSLSEIKSWTEYCIENFDSL 122
K R+IQS +E+++W E+ I SL
Sbjct 5 KDRNIQSYTEMQAWLEHLISEGQSL 29
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 25.0 bits (53), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (87%), Gaps = 0/15 (0%)
Query 98 KSRHIQSLSEIKSWT 112
+SRHIQ+ SEI +W+
Sbjct 14 RSRHIQAPSEIIAWS 28
> Gokush_Human_feces_A_019_Microviridae_AG0440_hypothetical.protein
Length=162
Score = 26.2 bits (56), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 11/74 (15%)
Query 13 RLSYNYDYDSKKSKFVVR----DKLAVLSSYADSDGVLHVLN----DISLLFNQQRLENR 64
RL++ + YD K +K +V+ D+ A + SY + + +++N D S++ QRL +
Sbjct 23 RLTFRWAYDDKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAFDPSVV---QRLGAQ 79
Query 65 LSSTELREMFNRYS 78
L+ E ++ N S
Sbjct 80 LNDEEPQDFTNMPS 93
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 24.6 bits (52), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 8/17 (47%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
Query 98 KSRHIQSLSEIKSWTEY 114
K R++QS +E+K+W+E+
Sbjct 5 KPRNVQSHAELKAWSEF 21
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 25.8 bits (55), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 7/40 (18%)
Query 98 KSRHIQSLSEIKSWTEYC---IENFDS----LLKAQQAKE 130
+SR+IQS SEI +W++ EN +S L++A+ AK+
Sbjct 116 RSRYIQSPSEILAWSKELSAYAENLESQAQELIEAENAKQ 155
Lambda K H a alpha
0.312 0.127 0.344 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 10508354