bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-24_CDS_annotation_glimmer3.pl_2_4

Length=135
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4            20.8    6.2


> Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4
Length=348

 Score = 20.8 bits (42),  Expect = 6.2, Method: Compositional matrix adjust.
 Identities = 10/39 (26%), Positives = 19/39 (49%), Gaps = 0/39 (0%)

Query  80   CYYLPEMELAGFIRSLSSDVSFFEMKLLPASAQLQGLLL  118
            CY   +M  A +  +L+ D    +  L+PA  +  G ++
Sbjct  80   CYLEAKMWKANYWLTLTYDEEHIQHLLVPAVDKKTGEVI  118



Lambda      K        H        a         alpha
   0.320    0.140    0.412    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 8470575