bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-22_CDS_annotation_glimmer3.pl_2_3
Length=113
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_33_003_Microviridae_AG063_hypothetical.protein 186 4e-63
Gokush_Human_feces_E_007_Microviridae_AG0409_putative.VP3 147 4e-47
Gokush_Human_feces_E_017_Microviridae_AG0129_hypothetical.protein 54.3 4e-12
Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein 51.2 5e-11
Gokush_Human_feces_A_019_Microviridae_AG0440_hypothetical.protein 50.4 9e-11
Gokush_Human_gut_32_030_Microviridae_AG0187_putative.VP3 35.4 3e-05
Gokush_Human_gut_31_045_Microviridae_AG0116_putative.VP3 35.4 3e-05
Gokush_Human_gut_27_035_Microviridae_AG0165_putative.VP3 35.4 3e-05
Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3 32.7 3e-04
Gokush_Human_feces_E_009_Microviridae_AG0284_putative.VP3 32.0 6e-04
> Gokush_Human_gut_33_003_Microviridae_AG063_hypothetical.protein
Length=132
Score = 186 bits (473), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 86/95 (91%), Positives = 93/95 (98%), Gaps = 0/95 (0%)
Query 1 MRKQYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRKASFDPQFLKSLSEGAM 60
+RKQYVWTKDEKG+EVLQET PIDIQQEIESYADECDIK+I+RKASFDP+FLKSLSEGAM
Sbjct 20 LRKQYVWTKDEKGEEVLQETTPIDIQQEIESYADECDIKNIVRKASFDPEFLKSLSEGAM 79
Query 61 TGAEVDITEWPQNIHEYHRMIATAQANAMKLEELQ 95
TG EVDITE+PQNIHEYHRMIATAQANAMKL+ELQ
Sbjct 80 TGTEVDITEFPQNIHEYHRMIATAQANAMKLKELQ 114
> Gokush_Human_feces_E_007_Microviridae_AG0409_putative.VP3
Length=182
Score = 147 bits (371), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 69/95 (73%), Positives = 78/95 (82%), Gaps = 0/95 (0%)
Query 1 MRKQYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRKASFDPQFLKSLSEGAM 60
+RKQYVW KDEKG L ET PIDIQ EIESYADECDIK+I+RKASFDP+F KSL + A
Sbjct 71 LRKQYVWGKDEKGNNKLIETEPIDIQAEIESYADECDIKNIVRKASFDPEFAKSLVDSAK 130
Query 61 TGAEVDITEWPQNIHEYHRMIATAQANAMKLEELQ 95
T +DITEWP NIHEYH MIATAQANAM+L+ +Q
Sbjct 131 TDEIIDITEWPTNIHEYHAMIATAQANAMELQRMQ 165
> Gokush_Human_feces_E_017_Microviridae_AG0129_hypothetical.protein
Length=161
Score = 54.3 bits (129), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 0/90 (0%)
Query 2 RKQYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRKASFDPQFLKSLSEGAMT 61
R + WT DEKG + L + ID EI+SY +E I++II +A+FDP ++ L
Sbjct 23 RLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAFDPSIVQKLGAQLSD 82
Query 62 GAEVDITEWPQNIHEYHRMIATAQANAMKL 91
D T P + E M+ A+ KL
Sbjct 83 TEPQDFTNMPSTLAEAQNMMIQAENTWNKL 112
> Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein
Length=157
Score = 51.2 bits (121), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 0/90 (0%)
Query 2 RKQYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRKASFDPQFLKSLSEGAMT 61
R + WT DEKG + L + ID EI+SY +E I++II +A++DP ++ L
Sbjct 23 RLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAYDPSIVQKLGAQLSD 82
Query 62 GAEVDITEWPQNIHEYHRMIATAQANAMKL 91
D T P + E ++ A+ KL
Sbjct 83 AEPQDFTNMPSTLAEAQNLMIQAEQTWDKL 112
> Gokush_Human_feces_A_019_Microviridae_AG0440_hypothetical.protein
Length=162
Score = 50.4 bits (119), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/91 (32%), Positives = 45/91 (49%), Gaps = 0/91 (0%)
Query 1 MRKQYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRKASFDPQFLKSLSEGAM 60
+R + W D+KG + L + ID EI+SY +E I++II +A+FDP ++ L
Sbjct 22 VRLTFRWAYDDKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAFDPSVVQRLGAQLN 81
Query 61 TGAEVDITEWPQNIHEYHRMIATAQANAMKL 91
D T P + E M+ A+ KL
Sbjct 82 DEEPQDFTNMPSTLAEAQNMMIQAENTWNKL 112
> Gokush_Human_gut_32_030_Microviridae_AG0187_putative.VP3
Length=157
Score = 35.4 bits (80), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 15/40 (38%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
Query 5 YVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRK 44
Y DEKG+ VL+E+ ++ I+SYA+ CDI ++++
Sbjct 25 YAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVLMKR 64
> Gokush_Human_gut_31_045_Microviridae_AG0116_putative.VP3
Length=157
Score = 35.4 bits (80), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 15/40 (38%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
Query 5 YVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRK 44
Y DEKG+ VL+E+ ++ I+SYA+ CDI ++++
Sbjct 25 YAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVLMKR 64
> Gokush_Human_gut_27_035_Microviridae_AG0165_putative.VP3
Length=157
Score = 35.4 bits (80), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 15/40 (38%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
Query 5 YVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRK 44
Y DEKG+ VL+E+ ++ I+SYA+ CDI ++++
Sbjct 25 YAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVLMKR 64
> Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3
Length=160
Score = 32.7 bits (73), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (33%), Positives = 38/70 (54%), Gaps = 6/70 (9%)
Query 4 QYVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSII-RKASFDPQFLKSLSEGAMTG 62
+Y DEKG+ VL E ID EI+S+A+ D+ ++ R A D + +LS+ G
Sbjct 23 RYGGHYDEKGRVVLDEIGRIDTYAEIQSHAESVDLHVLMERYARGD---VDALSKA--QG 77
Query 63 AEVDITEWPQ 72
D+ ++P+
Sbjct 78 FYGDVLDFPK 87
> Gokush_Human_feces_E_009_Microviridae_AG0284_putative.VP3
Length=148
Score = 32.0 bits (71), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 10/79 (13%)
Query 5 YVWTKDEKGQEVLQETAPIDIQQEIESYADECDIKSIIRK--ASFDPQFLKSLSEGAMTG 62
Y D G L+E+ I+I +I+S+ D CDI +I++ A+ D L + G
Sbjct 17 YNPRVDSDGVLHLEESGKINIYDQIQSHKDSCDINLLIQRCVATGDESILSRVQ-----G 71
Query 63 AEVDITEWPQNIHEYHRMI 81
A D ++ P H Y M+
Sbjct 72 AYGDFSDMP---HTYADML 87
Lambda K H a alpha
0.313 0.127 0.362 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6275005