bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_2

Length=101
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Bourget_224_Microviridae_AG0246_putative.VP2                 21.2    2.8
  Gokush_Human_feces_A_019_Microviridae_AG0437_putative.VP2           20.8    3.6


> Gokush_Bourget_224_Microviridae_AG0246_putative.VP2
Length=249

 Score = 21.2 bits (43),  Expect = 2.8, Method: Compositional matrix adjust.
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 0/20 (0%)

Query  7    SQLLAESGKKEEEIKNVNLE  26
            S+L  E+ K  EEIKNV LE
Sbjct  147  SKLEVEAKKISEEIKNVPLE  166


> Gokush_Human_feces_A_019_Microviridae_AG0437_putative.VP2
Length=300

 Score = 20.8 bits (42),  Expect = 3.6, Method: Compositional matrix adjust.
 Identities = 11/27 (41%), Positives = 18/27 (67%), Gaps = 1/27 (4%)

Query  8    QLLAESGKKEEEIKNVNLEIEERKVSK  34
            Q  A SG+  +++KN N+E+   KV+K
Sbjct  235  QQGANSGRSWQQLKN-NVEVVTDKVAK  260



Lambda      K        H        a         alpha
   0.314    0.131    0.352    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5045304