bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters



Query= Contig-18_CDS_annotation_glimmer3.pl_2_1

Length=56
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical....  23.5    0.12 
  Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical....  20.8    0.98 
  Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1  18.9    4.7


> Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.protein
Length=215

 Score = 23.5 bits (49),  Expect = 0.12, Method: Composition-based stats.
 Identities = 7/26 (27%), Positives = 15/26 (58%), Gaps = 0/26 (0%)

Query  31  CTHKYSLKANGVQIDTINVETTTKIK  56
           C++   +  NG+  DT+ +E+  K +
Sbjct  54  CSYSQKVFRNGIHYDTVRIESKIKTR  79


> Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.protein
Length=192

 Score = 20.8 bits (42),  Expect = 0.98, Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 0/24 (0%)

Query  31  CTHKYSLKANGVQIDTINVETTTK  54
           C++   +  +GV  DT+ VE+  K
Sbjct  31  CSYTQKVFRHGVHHDTVKVESIIK  54


> Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1
Length=518

 Score = 18.9 bits (37),  Expect = 4.7, Method: Composition-based stats.
 Identities = 10/24 (42%), Positives = 13/24 (54%), Gaps = 0/24 (0%)

Query  30   GCTHKYSLKANGVQIDTINVETTT  53
            G T KY  + +G  I  INV+  T
Sbjct  363  GNTIKYRCEEHGWIIGIINVQPVT  386



Lambda      K        H        a         alpha
   0.309    0.125    0.340    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3677548