bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_2

Length=56
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1            18.5    6.6
  Gokush_Human_feces_A_013_Microviridae_AG011_putative.VP4            18.5    7.4
  Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1           18.5    7.4
  Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1      18.5    7.7
  Pichovirinae_Bourget_523_Microviridae_AG0337_hypothetical.prote...  18.5    8.7  


> Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1
Length=587

 Score = 18.5 bits (36),  Expect = 6.6, Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 0/25 (0%)

Query  24   FVPNHVYDKSSLVYRNAADIRYIAD  48
            + PN V  +    Y  + DI ++AD
Sbjct  503  YKPNRVTGEMRSSYAKSLDIWHLAD  527


> Gokush_Human_feces_A_013_Microviridae_AG011_putative.VP4
Length=330

 Score = 18.5 bits (36),  Expect = 7.4, Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 14/24 (58%), Gaps = 0/24 (0%)

Query  6    VNICISEIRNLLRSIDRSFVPNHV  29
            + +C  + + L++ I R F  +H+
Sbjct  100  LTLCKRDFQLLMKRIRRRFPDDHI  123


> Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1
Length=569

 Score = 18.5 bits (36),  Expect = 7.4, Method: Composition-based stats.
 Identities = 7/12 (58%), Positives = 10/12 (83%), Gaps = 0/12 (0%)

Query  44   RYIADILCKSLT  55
            ++IADIL K+ T
Sbjct  542  QFIADILVKNTT  553


> Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1
Length=589

 Score = 18.5 bits (36),  Expect = 7.7, Method: Composition-based stats.
 Identities = 10/36 (28%), Positives = 18/36 (50%), Gaps = 4/36 (11%)

Query  7   NICISE----IRNLLRSIDRSFVPNHVYDKSSLVYR  38
           N+C+ +    I + + +IDR      V D  + VY+
Sbjct  62  NVCVKKEYFFIPDRIYNIDRQLNFQGVTDTPNTVYK  97


> Pichovirinae_Bourget_523_Microviridae_AG0337_hypothetical.protein.BACEGG.02723
Length=307

 Score = 18.5 bits (36),  Expect = 8.7, Method: Composition-based stats.
 Identities = 6/11 (55%), Positives = 7/11 (64%), Gaps = 0/11 (0%)

Query  26  PNHVYDKSSLV  36
           PN VYDK   +
Sbjct  75  PNMVYDKGGAI  85



Lambda      K        H        a         alpha
   0.326    0.138    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3677548