bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Microviridae_proteins.fasta 575 sequences; 147,441 total letters Query= Contig-10_CDS_annotation_glimmer3.pl_2_6 Length=72 Score E Sequences producing significant alignments: (Bits) Value Microvirus_gi|89888654|ref|YP_512417.1|_gpG_[Enterobacteria_pha... 21.9 0.59 > Microvirus_gi|89888654|ref|YP_512417.1|_gpG_[Enterobacteria_phage_WA13_sensu_lato] Length=181 Score = 21.9 bits (45), Expect = 0.59, Method: Compositional matrix adjust. Identities = 7/26 (27%), Positives = 14/26 (54%), Gaps = 0/26 (0%) Query 1 LDDLANPDFIGDSMVLMMRDRFRVSS 26 + ANP+ + ++ R FR++S Sbjct 22 IAPAANPEVVNSGEIVAGRSTFRIAS 47 Lambda K H a alpha 0.325 0.140 0.413 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 3698730