bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_4

Length=67
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  pte:PTT_15305  hypothetical protein                                 33.5    2.3
  plm:Plim_4133  GTP-binding protein HSR1-like protein                32.0    10.0


> pte:PTT_15305  hypothetical protein
Length=380

 Score = 33.5 bits (75),  Expect = 2.3, Method: Composition-based stats.
 Identities = 18/61 (30%), Positives = 34/61 (56%), Gaps = 1/61 (2%)

Query  8   WIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQS-VDSTRIDVQPN  66
           WIE  KL  TFI+  + +  + + TASM ++ + ++  Q+ +Q  + S  D   I+++  
Sbjct  6   WIEEEKLKKTFIVATLASTLVGTFTASMGLWERVADRRQQHRQKAKDSKQDGEIIELKKQ  65

Query  67  F  67
           F
Sbjct  66  F  66


> plm:Plim_4133  GTP-binding protein HSR1-like protein
Length=840

 Score = 32.0 bits (71),  Expect = 10.0, Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 11/63 (17%)

Query  3    ITPQQWIEVVKLISTFI------IGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQSV  56
            + P  W+ ++ + +  +      +G++TALC      S+S +W +S       Q+TR ++
Sbjct  314  LIPYLWLALIGIYAMIVDEWWLPLGIVTALC-----WSLSFYWWSSQKRAPISQSTRMAI  368

Query  57   DST  59
            D T
Sbjct  369  DET  371



Lambda      K        H        a         alpha
   0.319    0.126    0.376    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127864635584