bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_2

Length=177
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  dai:Desaci_4688  FAD-dependent dehydrogenase                        37.4    1.4
  has:Halsa_1847  FAD-dependent pyridine nucleotide-disulfide oxi...  35.4    5.7
  pco:PHACADRAFT_253657  hypothetical protein                         35.0    7.0
  ccb:Clocel_0286  HAD-superfamily hydrolase                          34.7    8.3


> dai:Desaci_4688  FAD-dependent dehydrogenase
Length=471

 Score = 37.4 bits (85),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 30/92 (33%), Positives = 44/92 (48%), Gaps = 6/92 (7%)

Query  86   RFLAESRRIKSSSTQSIMDKMPDDLILDTLKSRHLQHPSELL-AFSEQLSSMASD----M  140
            R   +SR  KS++  +++  +P DL    L +R+L   +E L AF +    M S      
Sbjct  357  RRTTDSRLRKSTTIPTLLSAVPGDLSY-VLPARYLTSLTETLRAFDKIAPGMYSKNTLLY  415

Query  141  EEEYKAYVESQTVKNNEETSVDNAGSAGSAAG  172
              E K Y     VKNN ET++ N  + G  AG
Sbjct  416  GVEVKFYSSKVKVKNNFETAIPNLYTIGDGAG  447


> has:Halsa_1847  FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Length=466

 Score = 35.4 bits (80),  Expect = 5.7, Method: Compositional matrix adjust.
 Identities = 29/92 (32%), Positives = 41/92 (45%), Gaps = 6/92 (7%)

Query  86   RFLAESRRIKSSSTQSIMDKMPDDLILDTLKSRHLQHPSELLAFSEQLSSMASDMEE---  142
            R   + R  +S +  ++ D  P DL L  L  RHL    E+L   ++L+      +    
Sbjct  350  RRTTDERLERSITEPTLKDATPGDLSL-VLPHRHLTGIIEMLKALDELAPGLYSRDTLLY  408

Query  143  --EYKAYVESQTVKNNEETSVDNAGSAGSAAG  172
              E K Y    +VKNN E+ VDN    G  AG
Sbjct  409  GVEVKFYSSRLSVKNNLESKVDNLYFGGDGAG  440


> pco:PHACADRAFT_253657  hypothetical protein
Length=812

 Score = 35.0 bits (79),  Expect = 7.0, Method: Compositional matrix adjust.
 Identities = 35/137 (26%), Positives = 62/137 (45%), Gaps = 28/137 (20%)

Query  23   SAKCFNPVVVEGEITLEVDNVDLF------RIEQVEHTDSAESYIRVR------SDISM-  69
            +AK  NP+V      L  +N+D++       I + ++  + ++  RVR      S++   
Sbjct  600  AAKFLNPLV-----ALAAENIDVWIAIYNVAIRRKKYLQAVQALNRVRALDEGHSELHFC  654

Query  70   LFHAEDTAKKIGTEGFRFLAESRRIKSSSTQSIMDKMPDDLILDTLKSRHLQH----PSE  125
            L H + T   +  E          I  + +QSI   +P D+ LDT  S++LQ     P  
Sbjct  655  LVHFKKTVSSLPQE------PPAPIGPTVSQSISGLLPADVALDTFNSQYLQKYPGSPRA  708

Query  126  LLAFSEQLSSMASDMEE  142
              AF+  L ++ + +EE
Sbjct  709  SFAFARALKALDAPVEE  725


> ccb:Clocel_0286  HAD-superfamily hydrolase
Length=231

 Score = 34.7 bits (78),  Expect = 8.3, Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (4%)

Query  26   CFNPVVVEGEITLEVDNVDLFRIEQVEHTDSAESYIRVRSDISMLFHAEDTAKKIGTEGF  85
            CF+P++V  E+ +   N+D+FRI  ++    A+  I V  D      +  TA   G    
Sbjct  141  CFDPIIVAEEVGVAKPNIDIFRIACIKANVQAKDCIYVGDDFKTDILSCSTADMNGIWLN  200

Query  86   RFLAESRRIKSSSTQSIMD  104
            R+  ES    +S+T+ I D
Sbjct  201  RYNQESI---NSTTKMIQD  216



Lambda      K        H        a         alpha
   0.314    0.127    0.348    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 153723455211