bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-24_CDS_annotation_glimmer3.pl_2_4 Length=193 Score E Sequences producing significant alignments: (Bits) Value clv:102094494 FAM83F; family with sequence similarity 83, memb... 37.4 1.6 aac:Aaci_3029 hypothetical protein 35.4 1.6 mro:MROS_0456 hypothetical protein 36.6 2.5 ypq:DJ40_1373 acrR; HTH-type transcriptional regulator AcrR 35.0 6.1 ypb:YPTS_1027 DNA-binding transcriptional repressor AcrR 35.0 6.1 ypy:YPK_3206 DNA-binding transcriptional repressor AcrR 35.0 6.1 ypi:YpsIP31758_3066 acrR; DNA-binding transcriptional represso... 35.0 6.1 yps:YPTB0985 acrR; DNA-binding transcriptional repressor AcrR 35.0 6.1 yph:YPC_3412 acrR; DNA-binding transcriptional repressor 35.0 6.1 ypx:YPD8_2735 acrR; putative tetR-family transcriptional regul... 35.0 6.1 ypd:YPD4_2744 acrR; putative tetR-family transcriptional regul... 35.0 6.1 ypt:A1122_10300 DNA-binding transcriptional repressor AcrR 35.0 6.1 ypz:YPZ3_2756 acrR; putative tetR-family transcriptional regul... 35.0 6.1 ypg:YpAngola_A2881 acrR; DNA-binding transcriptional repressor... 35.0 6.1 ypp:YPDSF_2766 DNA-binding transcriptional repressor AcrR 35.0 6.1 ypm:YP_0800 acrR2; DNA-binding transcriptional repressor AcrR 35.0 6.1 ypn:YPN_0959 DNA-binding transcriptional repressor AcrR 35.0 6.1 ypa:YPA_2626 DNA-binding transcriptional repressor AcrR 35.0 6.1 ypk:y1051 acrR; DNA-binding transcriptional repressor AcrR 35.0 6.1 ype:YPO3131 acrR; DNA-binding transcriptional repressor AcrR 35.0 6.1 bmn:BMA10247_A2205 hypothetical protein 35.0 8.3 bml:BMA10229_1229 hypothetical protein 35.0 8.3 bmal:DM55_3860 SMP-30/Gluconolaconase/LRE-like region family p... 35.0 8.3 bmv:BMASAVP1_0942 hypothetical protein 35.0 8.3 bma:BMAA1927 hypothetical protein 35.0 8.3 brm:Bmur_2752 5'-nucleotidase 35.0 9.2 > clv:102094494 FAM83F; family with sequence similarity 83, member F Length=507 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/157 (25%), Positives = 67/157 (43%), Gaps = 16/157 (10%) Query 44 GNLDVSIALRPEERLSRTLRDILIVLHLFPYISKKIAAFVLLHDSLTALDFSSFHLPLKK 103 GN++ ++RL++ L D++ + FP I + L+ S L FS H+ LK Sbjct 346 GNMEKEETSESKKRLNQFLNDLITLEQEFPEIDPPLENVNKLNRSPQKL-FSRLHVDLKN 404 Query 104 VGK--ETFLSSLMESACRSMASIELFGHG-----------ARLSIPAFFDPSHIAVVLYL 150 K E+ E + + F G + + +F H L Sbjct 405 KSKSRESIRDVKKEDVQANSKQGKRFATGLFSRKAKRSPGSSIEANSFASEGHSGEDLG- 463 Query 151 NMLRYYDMLGIS-ASGQPTGNLPSSVSPSSSMTTTSR 186 NM Y+ L I ASG+ TG + ++SP+S+M+ ++ Sbjct 464 NMKLEYERLSIGHASGRSTGGISGNLSPNSTMSDKNK 500 > aac:Aaci_3029 hypothetical protein Length=98 Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 0/45 (0%) Query 76 SKKIAAFVLLHDSLTALDFSSFHLPLKKVGKETFLSSLMESACRS 120 ++K A +L HD LT L+++SFH+ +K+ L++ + A R+ Sbjct 11 ARKRAEELLTHDDLTMLEYNSFHIIVKQSDTNEILANALREAVRA 55 > mro:MROS_0456 hypothetical protein Length=517 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/140 (28%), Positives = 58/140 (41%), Gaps = 33/140 (24%) Query 24 YFSLTPTNSPR-------ILSELLIHVGNLDVSIALRP---------EERLSRTLRDILI 67 YFSL R +S+LL+H + +V+ RP +E RT +I Sbjct 73 YFSLINEEIKRNKKLSSDFVSKLLLHASSFNVNFLARPRWTLTKFIFDENNHRTGIEIKQ 132 Query 68 VLH-----------LFPYISKKIAAFVLLHDSLTALDFSSFHLPLKKVGKETFLSSLMES 116 +L+ +F YI KK SL + +FS + +GKET L SL+ Sbjct 133 ILNYLYYYSYLKKIIFSYIDKKKII------SLNSEEFSELLQKIDDIGKETNLQSLLSG 186 Query 117 ACRSMASIELFGHGARLSIP 136 A +SMA G + +P Sbjct 187 ALKSMADFFNIGELQKNKVP 206 > ypq:DJ40_1373 acrR; HTH-type transcriptional regulator AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypb:YPTS_1027 DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypy:YPK_3206 DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypi:YpsIP31758_3066 acrR; DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > yps:YPTB0985 acrR; DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > yph:YPC_3412 acrR; DNA-binding transcriptional repressor Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypx:YPD8_2735 acrR; putative tetR-family transcriptional regulator Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypd:YPD4_2744 acrR; putative tetR-family transcriptional regulator Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypt:A1122_10300 DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypz:YPZ3_2756 acrR; putative tetR-family transcriptional regulator Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypg:YpAngola_A2881 acrR; DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypp:YPDSF_2766 DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypm:YP_0800 acrR2; DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypn:YPN_0959 DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypa:YPA_2626 DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ypk:y1051 acrR; DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > ype:YPO3131 acrR; DNA-binding transcriptional repressor AcrR Length=218 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/93 (27%), Positives = 45/93 (48%), Gaps = 13/93 (14%) Query 6 HTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDI 65 + +WE ++ + + I Y + P N RIL ELLI++ + E+R R L + Sbjct 60 NEVWELSESKID-QLEIEYQAKYPDNPLRILRELLIYI------LVSTREDRRRRALME- 111 Query 66 LIVLHLFPYISKKIAAFVLLHDSLTALDFSSFH 98 IV H ++ + + +HD+ LD +S+ Sbjct 112 -IVFHKCEFVGEMTS----VHDARKVLDLASYE 139 > bmn:BMA10247_A2205 hypothetical protein Length=630 Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 14/37 (38%), Positives = 24/37 (65%), Gaps = 0/37 (0%) Query 151 NMLRYYDMLGISASGQPTGNLPSSVSPSSSMTTTSRL 187 N + +Y + GI ASG+P+ PSS+ +S+ T+R+ Sbjct 457 NAISHYPLAGIDASGKPSWGAPSSIPTPASVQPTTRI 493 > bml:BMA10229_1229 hypothetical protein Length=630 Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 14/37 (38%), Positives = 24/37 (65%), Gaps = 0/37 (0%) Query 151 NMLRYYDMLGISASGQPTGNLPSSVSPSSSMTTTSRL 187 N + +Y + GI ASG+P+ PSS+ +S+ T+R+ Sbjct 457 NAISHYPLAGIDASGKPSWGAPSSIPTPASVQPTTRI 493 > bmal:DM55_3860 SMP-30/Gluconolaconase/LRE-like region family protein Length=638 Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 14/37 (38%), Positives = 24/37 (65%), Gaps = 0/37 (0%) Query 151 NMLRYYDMLGISASGQPTGNLPSSVSPSSSMTTTSRL 187 N + +Y + GI ASG+P+ PSS+ +S+ T+R+ Sbjct 465 NAISHYPLAGIDASGKPSWGAPSSIPTPASVQPTTRI 501 > bmv:BMASAVP1_0942 hypothetical protein Length=638 Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 14/37 (38%), Positives = 24/37 (65%), Gaps = 0/37 (0%) Query 151 NMLRYYDMLGISASGQPTGNLPSSVSPSSSMTTTSRL 187 N + +Y + GI ASG+P+ PSS+ +S+ T+R+ Sbjct 465 NAISHYPLAGIDASGKPSWGAPSSIPTPASVQPTTRI 501 > bma:BMAA1927 hypothetical protein Length=638 Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 14/37 (38%), Positives = 24/37 (65%), Gaps = 0/37 (0%) Query 151 NMLRYYDMLGISASGQPTGNLPSSVSPSSSMTTTSRL 187 N + +Y + GI ASG+P+ PSS+ +S+ T+R+ Sbjct 465 NAISHYPLAGIDASGKPSWGAPSSIPTPASVQPTTRI 501 > brm:Bmur_2752 5'-nucleotidase Length=613 Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (12%) Query 15 SLSAHISISYFSLTPTNSPRILSELL-------IHVGNLDVSIALRPEERLSRTLRDILI 67 SL ++ Y++ TN P I SE+L + VGN D+ +RLS+ L+ LI Sbjct 86 SLQGQPTVYYYNFVATNKPHIWSEVLNYMNYDAVGVGNHDIEAGHSVYDRLSKELKSPLI 145 Lambda K H a alpha 0.321 0.133 0.380 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 197776083863