bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-24_CDS_annotation_glimmer3.pl_2_3

Length=73
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  nvn:NVIE_005940  hypothetical protein                               32.7    2.4


> nvn:NVIE_005940  hypothetical protein
Length=125

 Score = 32.7 bits (73),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 19/58 (33%), Positives = 32/58 (55%), Gaps = 9/58 (16%)

Query  11   LYQSSNMLEDNQFYLVTEIYLNARSFVEFSHK------ISKLNQILSDSHYAESFYSV  62
            L+Q +N   DN+ ++  EI++N ++  E S K        KL +I+S+    E+FY V
Sbjct  69   LHQDAN---DNRHFVFDEIWVNMQALKEHSAKPYILALPQKLQEIVSEPPRVETFYEV  123



Lambda      K        H        a         alpha
   0.318    0.130    0.356    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125472237464