bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters



Query= Contig-16_CDS_annotation_glimmer3.pl_2_1

Length=83
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  npu:Npun_R3270  hypothetical protein                                34.7    1.3


> npu:Npun_R3270  hypothetical protein
Length=248

 Score = 34.7 bits (78),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 16/52 (31%), Positives = 29/52 (56%), Gaps = 0/52 (0%)

Query  31  HLATEEVFKSRKAAEMKINKTDWNLVSAFFFAIKEAVEFENKLKEQKIQETE  82
           HLA    F    AA+++ +KT  N+++ F+FA   +V F + L ++   E +
Sbjct  9   HLAGSGAFAYYSAAQIRDSKTRPNILAGFYFAESGSVPFLSALSDRAAAEGD  60



Lambda      K        H        a         alpha
   0.315    0.129    0.365    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126236627437