bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-14_CDS_annotation_glimmer3.pl_2_5 Length=72 Score E Sequences producing significant alignments: (Bits) Value mlr:MELLADRAFT_92333 hypothetical protein 32.3 8.7 > mlr:MELLADRAFT_92333 hypothetical protein Length=1594 Score = 32.3 bits (72), Expect = 8.7, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (4%) Query 11 GDSMVLMMRDRFRVSSVS-QCDEYCRRL 37 GDS V M+R+RF+++ S QCDE+ +L Sbjct 1543 GDSTVKMLRERFQLALTSDQCDEFVEKL 1570 Lambda K H a alpha 0.325 0.140 0.413 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 125870970484