bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-11_CDS_annotation_glimmer3.pl_2_8 Length=66 Score E Sequences producing significant alignments: (Bits) Value sve:SVEN_1591 metallo-beta-lactamase superfamily protein 32.0 5.0 cap:CLDAP_03890 adk; adenylate kinase 31.6 8.0 > sve:SVEN_1591 metallo-beta-lactamase superfamily protein Length=188 Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/40 (48%), Positives = 26/40 (65%), Gaps = 4/40 (10%) Query 26 NTYKIAEKFAKILNDPEETKLVCVI--ESWKLYPKEDEKT 63 NT+K AE FA +++D ETKL V+ ESW +YP + T Sbjct 134 NTWKDAEAFASLIHD-VETKLFAVLPDESW-IYPGHGKDT 171 > cap:CLDAP_03890 adk; adenylate kinase Length=222 Score = 31.6 bits (70), Expect = 8.0, Method: Composition-based stats. Identities = 19/56 (34%), Positives = 30/56 (54%), Gaps = 2/56 (4%) Query 9 IYVNNEKKMIEREIPGMNTYKIAEKFAKILNDPEETKLVCVIESWKLYPKEDEKTE 64 I V++E+ + R I G T + IL +P + VC I+ +LY +ED+K E Sbjct 117 IQVDDEETI--RRITGRRTCRTCGAVYHILYNPPKVAGVCDIDGGELYQREDDKEE 170 Lambda K H a alpha 0.311 0.128 0.361 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 128263368604