bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-8_CDS_annotation_glimmer3.pl_2_1 Length=461 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01608 103 5e-21 > 469590.BSCG_01608 Length=497 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 105/395 (27%), Positives = 167/395 (42%), Gaps = 51/395 (13%) Query 103 GLLKYVNIRDYQLFAKRLRKYLSKKIGKYEKIHSYVVSEYSPKTFRPHFHILFFFDSDEI 162 G + Y+ D QLF KRLR Y++K+ EK+ + V EY P FRPH+H+L F SDE Sbjct 115 GDVPYLRKTDLQLFLKRLRYYVTKQKPS-EKVRYFAVGEYGPVHFRPHYHLLLFLQSDEA 173 Query 163 AKNFRQAVYQSWRLGRVDTQLAREQANSYVANYLNSVVSIPFVYKAKKSIRPRSRFSNLF 222 + + + ++W GRVD Q+++ Q ++YVA+Y+NS +IP V+KA S+ P F Sbjct 174 LQICSENISKAWTFGRVDCQVSKGQCSNYVASYVNSSCTIPKVFKA-SSVCP-------F 225 Query 223 GFEEVKKGIQHASDKRSALFDGVP-------YISNQKFVRYVPSGSHIDRLFPRFTHYDG 275 K G +R ++ P + N K+ + S +PR + Sbjct 226 SVHSQKLGQGFLDCQREKIYSLTPENFIRSSIVLNGKYKEFDVWRSCYSFFYPRCKGFVT 285 Query 276 SFLRRSSQIYEVVQRVLRLFARNEPFKKATPRNVSEFVCWWCEYNFRRGCQIKDFPDYMQ 335 R + Y + LF P K T E + ++ + + D Y Sbjct 286 KSSRERAYSYSIYDTARLLF----PDAKTTFSLAKEIAIYIYYFHNPKETYLLDLYGYCS 341 Query 336 EFLHIVRLDGYSFLNWDVPI-----GKISRFFYR----------FNRFEAMKGSL---RS 377 + + L Y F + DV + G+ SR+ +R F F +L +S Sbjct 342 DQSKLYELSQY-FYDSDVLLHSFNSGEFSRYVHRIYTELLISKHFLYFVCTHNTLAERKS 400 Query 378 KLKAVSLFYDYRDYQSLKNQLSLQELVFAE--LGYSDELFDSFYVKPHIKVLKNAYID-- 433 K + + FY DY L Q+L + +G D D++ + N Y D Sbjct 401 KQRLIEEFYSRLDYMHLTKFFEAQQLFYESDLIGDDDLCTDNWDNSYYPYFYNNVYTDTN 460 Query 434 --------KWKDVNYKEVHYFRVKHKVLNDENNIF 460 + + K++ R+KHK LND N +F Sbjct 461 LFEKTPVYRLYSSDVKKLFNDRIKHKKLNDANKVF 495 Lambda K H a alpha 0.325 0.140 0.424 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 949356087000