bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-6_CDS_annotation_glimmer3.pl_2_6 Length=94 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01608 157 4e-44 > 469590.BSCG_01608 Length=497 Score = 157 bits (398), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 77/94 (82%), Positives = 85/94 (90%), Gaps = 1/94 (1%) Query 1 MIEEFYSYLDYMHLTTFFESQQEFYESDLIGDDDLCTDQWENSYYPYFYYNVHTNEP-FE 59 +IEEFYS LDYMHLT FFE+QQ FYESDLIGDDDLCTD W+NSYYPYFY NV+T+ FE Sbjct 404 LIEEFYSRLDYMHLTKFFEAQQLFYESDLIGDDDLCTDNWDNSYYPYFYNNVYTDTNLFE 463 Query 60 KTPVYRLYASDVKKLFNDRIKHKKLNDANKIFID 93 KTPVYRLY+SDVKKLFNDRIKHKKLNDANK+F + Sbjct 464 KTPVYRLYSSDVKKLFNDRIKHKKLNDANKVFFE 497 Lambda K H a alpha 0.320 0.139 0.428 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 124816901100