bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-35_CDS_annotation_glimmer3.pl_2_2 Length=177 Score E Sequences producing significant alignments: (Bits) Value 483216.BACEGG_02722 43.5 0.003 > 483216.BACEGG_02722 Length=155 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (3%) Query 22 FSAKCFNPVVVEGEITLEVDNVDLFRIEQVEHTDSAESYIRVRSDISMLFHAEDTAKKIG 81 F N V+ G +E + F +++E D +S IR+ SDI MLF+ + K Sbjct 15 FQPNNVNSAVLSGSEFVEPSPLHEFMFQEIE-CDGKKS-IRITSDIYMLFNQQRLDKLTR 72 Query 82 TEGFRFLAESRRIKSSSTQSIMDKMPDDLILDTLKSRHLQHPSELLAFSEQLSS 135 ++ + ++ + + KM D+ + +KSR +Q PSEL+A+S+ L S Sbjct 73 SQLVEYF-DNLSVSEPKMSDLRKKMTDEQLCSFVKSRFIQTPSELMAWSQYLMS 125 Lambda K H a alpha 0.314 0.127 0.348 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 149402584330