bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-34_CDS_annotation_glimmer3.pl_2_2

Length=59
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  7070.TC002881-PA                                                    35.4    0.68


> 7070.TC002881-PA
Length=2779

 Score = 35.4 bits (80),  Expect = 0.68, Method: Composition-based stats.
 Identities = 22/58 (38%), Positives = 29/58 (50%), Gaps = 12/58 (21%)

Query  4     SVLKTAADGTKGAIFGGSS-----------YTTGDSLQKASSAPV-PAYDGYVAPVKI  49
             S+  T A  T G+IFGGS            +  GDSL KA+ +PV P +   VAP  +
Sbjct  2312  SLFGTPATTTTGSIFGGSPAVFGKGTNKPIFGGGDSLAKATESPVRPVFGAAVAPTDV  2369



Lambda      K        H        a         alpha
   0.317    0.130    0.399    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125187668910