bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-26_CDS_annotation_glimmer3.pl_2_2 Length=111 Score E Sequences producing significant alignments: (Bits) Value 765910.MarpuDRAFT_3231 38.1 0.16 > 765910.MarpuDRAFT_3231 Length=530 Score = 38.1 bits (87), Expect = 0.16, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 37/65 (57%), Gaps = 3/65 (5%) Query 11 IKTDYEFQNG-ERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDR-WEVAQA 68 + ++ Q+G ERI+ R TE+NE + GA +++ R+ + P Y++ TD WE Sbjct 327 VYVEFGIQSGSERIKRLYDR-TESNERVVAGAELLHRHRDRLLPPDYHVITDNPWETEAD 385 Query 69 AMDAV 73 AMD V Sbjct 386 AMDTV 390 Lambda K H a alpha 0.308 0.127 0.353 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 125997773440