bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-13_CDS_annotation_glimmer3.pl_2_2

Length=638
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              66.2    1e-08


> 888743.HMPREF9141_0985
Length=531

 Score = 66.2 bits (160),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 106/248 (43%), Gaps = 34/248 (14%)

Query  422  ERCETPMFEGGVSQEIVFQEVISNS-----ATENEPLGTLAGRGVTTGRQKGGHIRIKIT  476
             R     F GG    +V  EV++ S     A E+  LG L G+GV  G      I   + 
Sbjct  287  SRAGDARFIGGFDNPVVISEVVNQSEFDRGADESPCLGDLGGKGV--GSLNSSSIDFDVK  344

Query  477  EPCYIMCICSITPRIDYGQGNTWDTYLETM--DDWHKPALDGIGYQDSLNGE--RAWWTD  532
            E   IMCI S+ P+ +Y  G  +D +   +  +D+ +P    +GYQ  +  +    +  +
Sbjct  345  EHGIIMCIYSVVPQTEY-NGTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLISTYLDN  403

Query  533  YLTADPD-LKRTSAGKTVAWIN--------------YMTNVNRTFGNFAPGMSESFMVLN  577
             +   P+  KR +AG  ++ I               Y T+ +  FG F  G+S S+    
Sbjct  404  PVPDGPEKQKRLAAGYPLSSIEANNRLLGWQVRYNEYKTSRDLVFGEFESGLSLSYWCSP  463

Query  578  R-NYSMNNSASPQI------EDLTTYIDPVKFNYIFADANIDAMNFWVQTKFEIKARRLI  630
            R ++  +  A  +            Y++P   N IF  + + A +F V + F++KA R +
Sbjct  464  RYDFGFDGKAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDVKAVRPM  523

Query  631  SAKQIPNL  638
            S   +  L
Sbjct  524  SVSGLAGL  531



Lambda      K        H        a         alpha
   0.317    0.134    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1446858795720