bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_8

Length=540
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              55.8    1e-05


> 888743.HMPREF9141_0985
Length=531

 Score = 55.8 bits (133),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 120/308 (39%), Gaps = 48/308 (16%)

Query  265  VNGISEVTAIDVTDGKLTMDALNLQQKVYNMLNRIAVSGGTYRDWLETVFTGGNYMERCE  324
            +NG+S ++  D+      +D +    +  N L+        Y   +E  F       R  
Sbjct  240  INGVSVLSVNDLR-AAFALDKMLEATRRANGLD--------YSSQIEAHFGFRVPESRAG  290

Query  325  TPIFEGGMSTEIVFQEVISNS----ASGEQP-LGTLAGRGYDTGKQKGGHVKIKVTEPSF  379
               F GG    +V  EV++ S     + E P LG L G+G   G      +   V E   
Sbjct  291  DARFIGGFDNPVVISEVVNQSEFDRGADESPCLGDLGGKG--VGSLNSSSIDFDVKEHGI  348

Query  380  IMGIGSITPRIDYSQGNEF--YNEFLTLDDIHKPALDGIGYQ-----------------D  420
            IM I S+ P+ +Y  G  F  +N  L  +D  +P    +GYQ                 D
Sbjct  349  IMCIYSVVPQTEY-NGTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLISTYLDNPVPD  407

Query  421  SLNWQR---AWWDDNRMEKNGRLQPSAGKTVAWLNYMTNINRTFGNFAINDNEAFMVLNR  477
                Q+   A +  + +E N RL    G  V +  Y T+ +  FG F    + ++    R
Sbjct  408  GPEKQKRLAAGYPLSSIEANNRL---LGWQVRYNEYKTSRDLVFGEFESGLSLSYWCSPR  464

Query  478  NYEMSPSAGTNETKIAD-----LTTYIDPVKYNYIFAETNLDAMNFWVQTKFDIKVRRLI  532
             Y+        + K+ +        Y++P   N IF  + + A +F V + FD+K  R +
Sbjct  465  -YDFGFDGKAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDVKAVRPM  523

Query  533  SAKQIPNL  540
            S   +  L
Sbjct  524  SVSGLAGL  531



Lambda      K        H        a         alpha
   0.315    0.132    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1176326304120