bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-7_CDS_annotation_glimmer3.pl_2_5 Length=69 Score E Sequences producing significant alignments: (Bits) Value gi|525582330|gb|EPS28580.1| hypothetical protein PDE_03526 34.3 4.8 >gi|525582330|gb|EPS28580.1| hypothetical protein PDE_03526 [Penicillium oxalicum 114-2] Length=478 Score = 34.3 bits (77), Expect = 4.8, Method: Composition-based stats. Identities = 21/54 (39%), Positives = 29/54 (54%), Gaps = 3/54 (6%) Query 9 TFPTIHNDIVDGIPESYVHYFKQY--LYEIEDRRISQNTDVSVRPLD-ALSETG 59 +F DI+ GIPE + + KQY + IE + Q TD V+ L+ LSE G Sbjct 2 SFLRYRTDILTGIPEDRIQFLKQYEDWFTIEAPELRQITDHFVKELEKGLSEEG 55 Lambda K H a alpha 0.322 0.142 0.411 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 435507561048