bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_7

Length=639
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|547312923|ref|WP_022044635.1|  putative uncharacterized protein      617   0.0
gi|649555287|gb|KDS61824.1|  capsid family protein                    77.8    9e-12
gi|547920049|ref|WP_022322420.1|  capsid protein VP1                  65.9    5e-08
gi|649569140|gb|KDS75238.1|  capsid family protein                    62.4    5e-07
gi|649557305|gb|KDS63784.1|  capsid family protein                    58.5    2e-06
gi|639237429|ref|WP_024568106.1|  hypothetical protein                58.2    1e-05
gi|492501782|ref|WP_005867318.1|  hypothetical protein                57.8    2e-05
gi|444297909|dbj|GAC77759.1|  major capsid protein                    52.0    5e-04
gi|599087685|gb|AHN52768.1|  major capsid protein                     50.4    0.001
gi|599087681|gb|AHN52766.1|  major capsid protein                     50.1    0.001


>gi|547312923|ref|WP_022044635.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
 gi|524208404|emb|CCZ76639.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
Length=338

 Score =   617 bits (1590),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 298/338 (88%), Positives = 307/338 (91%), Gaps = 0/338 (0%)

Query  302  MACAGIQGYGGLLSVPYSPDLFSNIIKQGSSPAVEIEVMNALDASTDTGFSVAVPELRLK  361
            MACAGIQGYGGLLSVPYSPDLF NIIKQGSSPAVEIEVMNALD +  TGFSVAVPELRL+
Sbjct  1    MACAGIQGYGGLLSVPYSPDLFGNIIKQGSSPAVEIEVMNALDLNISTGFSVAVPELRLR  60

Query  362  TKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLGVWQASINPSNVRAMANGSA  421
            TK+QNWMDRLFVSGGRVGDVFRTLWG KSSA YVNKPDFLGVWQASINPSNVRAMANGSA
Sbjct  61   TKIQNWMDRLFVSGGRVGDVFRTLWGTKSSAIYVNKPDFLGVWQASINPSNVRAMANGSA  120

Query  422  SGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYFQGLHPDLASIS  481
            SGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLI MLVPEPAY QGLHPDLASIS
Sbjct  121  SGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLITMLVPEPAYSQGLHPDLASIS  180

Query  482  FGDDFNPELNGIGFQQVPRHRFTMMPRGMDDITAHQEKNPWLGYAGTGVTIDPNMASVGE  541
            FGDDFNPELNGIGFQ VPRHRF+MMPRG +     QE +PW G+ GTGV +DPNM SVGE
Sbjct  181  FGDDFNPELNGIGFQLVPRHRFSMMPRGFNFTGLDQEASPWFGHTGTGVLVDPNMVSVGE  240

Query  542  EVAWSWLRTDYPRLHGDFAQNGNYQYWVLARPFTSYFPDAGTGFYGDAESYSTYINPLDW  601
            EVAWSWLRTDY RLHGDFAQNGNYQYWVL R FT+YFPD GTGFY D E   TYINPLDW
Sbjct  241  EVAWSWLRTDYSRLHGDFAQNGNYQYWVLTRRFTTYFPDDGTGFYQDGEYTGTYINPLDW  300

Query  602  QYVFVDQTLMAGNFAYYGYFDLKVTSSLSANYMPYLGR  639
            QYVFVDQTLMAGNFAYYG FDL VTSSLSANYMPYLGR
Sbjct  301  QYVFVDQTLMAGNFAYYGTFDLNVTSSLSANYMPYLGR  338


>gi|649555287|gb|KDS61824.1| capsid family protein [Parabacteroides distasonis str. 3999B 
T(B) 4]
 gi|649560568|gb|KDS66876.1| capsid family protein [Parabacteroides distasonis str. 3999B 
T(B) 4]
 gi|649561020|gb|KDS67307.1| capsid family protein [Parabacteroides distasonis str. 3999B 
T(B) 4]
 gi|649562724|gb|KDS68908.1| capsid family protein [Parabacteroides distasonis str. 3999B 
T(B) 6]
Length=541

 Score = 77.8 bits (190),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 124/570 (22%), Positives = 214/570 (38%), Gaps = 109/570 (19%)

Query  28   TIHPGLAVPVHHRHLNVGERIRGRIDSLLQSQPMLGPLMNGFKLITIATFTPDSAIYGWM  87
            T++ G  +P+  + +  G++ R   + L++  P++ P+M+   + T   F P+  I+   
Sbjct  27   TVNAGELIPIMCKPVVPGDKFRVNTEMLVRLAPLVAPMMHRVDVFTHYFFVPNRLIWN--  84

Query  88   RNGRRYEPDEYTKFGKVYFPLAGPNIGNYIDPAFQIARRVRRLTFGLELNADRAKIYESW  147
                ++E D  TK            +     P F         T+      D A  + S+
Sbjct  85   ----KWE-DFITK-----------GVDGTDSPVFP--------TYSFPSTVDTANAHNSF  120

Query  148  VSDELNSTGDDGQPTHIGRGGLWDWLGIAPGAVCPNLGIKLPSVAGVRGQFYPPSFKFNG  207
                             G G LWD+LG+           ++ S  GV+    P  FK + 
Sbjct  121  -----------------GDGSLWDYLGLPSINQIGEAVFQVQSPNGVKA---PAGFKVSA  160

Query  208  APFFAYFL--SHYYYIANMQEKYMYFTRGVGEMQRVRPDGQQESLYRPFFSDVFTSFKPD  265
             PF AY L  + YY   N+  + +  T   G  Q        +   R +  D FTS  P 
Sbjct  161  LPFRAYHLIYNEYYRDQNLTSE-LEITLDSGNYQLPVNSSLWQLHRRAWEKDYFTSALP-  218

Query  266  DFLLYLDTLSYRTRVGAEIDALTLQLEG---IPINCVQAMACAGIQGYGGLLSVPYSPDL  322
                         + G E+   T+ + G   IP+   +  A   I  +     +  S  L
Sbjct  219  -----------WVQRGPEV---TVPINGGGEIPVEMKEGFAAQKITTFPDRKPISGSEVL  264

Query  323  FS--NIIKQGSSPAVEIEVMNALD---ASTDTGFSVAVPELRLKTKLQNWMDRLFVSGGR  377
            +S  +++  G   +++ + +   D    +TD    V + ++R    LQ W +R   SG R
Sbjct  265  YSAPSVLSYGQIGSIKGQALIEPDNFVVNTDQ-MGVNINDIRTSNALQRWFERNARSGSR  323

Query  378  VGDVFRTLWGVKSSAPYVNKPDFLGVWQASINPSNVRAMANGSASGEDANLG--QLAACV  435
              +   + +GV+SS   + +P FLG  +  I+ S V   ++  ++   AN+    ++A V
Sbjct  324  YIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQANMAGHGISAGV  383

Query  436  DRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYFQGLHPDLASISFGDDFNPELNGIGF  495
            +         G   Y +E G  M I  + P   Y QG+  D       D + PE   +G 
Sbjct  384  NH--------GFTRYFEEHGYIMGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEFAHLGE  435

Query  496  QQVPRHRFTMMPRGMDDITAHQEKNPWLGYAGTGVTIDPNMASVGEEVAWSWLRTDYPRL  555
            Q++                       +L  +        N  + G    ++  +     +
Sbjct  436  QEIKNEEL------------------YLNESDAA-----NEGTFGYTPRYAEYKYSQNEV  472

Query  556  HGDFAQNGNYQYWVLARPFTSYFPDAGTGF  585
            HGDF   GN  +W L R F    P+  T F
Sbjct  473  HGDF--RGNMAFWHLNRIFKEK-PNLNTTF  499


>gi|547920049|ref|WP_022322420.1| capsid protein VP1 [Parabacteroides merdae CAG:48]
 gi|524592961|emb|CDD13573.1| capsid protein VP1 [Parabacteroides merdae CAG:48]
Length=553

 Score = 65.9 bits (159),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 102/486 (21%), Positives = 193/486 (40%), Gaps = 67/486 (14%)

Query  28   TIHPGLAVPVHHRHLNVGERIRGRIDSLLQSQPMLGPLMNGFKLITIATFTPDSAIYGWM  87
            T++ G  VP+    +  G++ R + +SL++  P++ P+M+   + T   F P+  ++   
Sbjct  27   TLNMGELVPIMCMPVVSGDKFRVKTESLVRLAPLVAPMMHRVNVFTHYFFVPNRLVW---  83

Query  88   RNGRRYEPDEYTKFGKVYFPLAGPNIGNYIDPAFQIARRVRRLTFGLELNADRAKIYESW  147
                    +E+  F  +   + G ++     P F            +++N D   +  + 
Sbjct  84   --------NEWEDF--ITKGVDGEDM-----PMFP----------KIQINQDSHLVSSAS  118

Query  148  VSDELNSTGDDGQPTHIGRGGLWDWLGIAPGAVCPNLGIKLPSVAGVRGQFYPPSFKFNG  207
            +  E           + G   LWD+LG+   + C N    +     V G   P  F+ + 
Sbjct  119  LIKE-----------YFGDSSLWDYLGLPTLSACGNKSYDV-----VNGVKVPSGFQVSA  162

Query  208  APFFAYFL--SHYYYIANMQEKYMYFTRGVGEMQRVRPDGQQESLYR-PFFSDVFTSFKP  264
             PF AY L  + YY   N+ E  + FT G G            SL R  +  D FTS  P
Sbjct  163  LPFRAYQLIYNEYYRDQNLTEP-IDFTLGSGTTVGGDQLMALMSLRRRAWEKDYFTSALP  221

Query  265  DDFLLYLDTLSYRTR-VGAEIDALTLQLEGIPINCVQAMACAGIQGYGGLLSVPYSPD--  321
              +L     ++   +  G  +D +  + +      V +       G+   +++  + D  
Sbjct  222  --WLQRGPEVTVPVQGAGGSMDVV-YERQSDSQKWVDSSGREFENGHAYDITMARANDPN  278

Query  322  --LFSNIIKQGSSPAVEIEVMNALDASTDTGFSVAVPELRLKTKLQNWMDRLFVSGGRVG  379
              L   +    ++ A E++    L  + D    + + +LR    LQ W +R    G R  
Sbjct  279  SALMVAVNGGTNNRAPELDPNGTLKVNVDE-MGININDLRTSNALQRWFERNARGGSRYI  337

Query  380  DVFRTLWGVKSSAPYVNKPDFLGVWQASINPSNVRAMANGSASGEDANLG--QLAACVDR  437
            +   + +GV+SS   + +P FLG  +  I+ S V   ++   +   AN+    ++A ++ 
Sbjct  338  EQILSHFGVRSSDARLQRPQFLGGGRMPISVSEVLQTSSTDETSPQANMAGHGISAGIN-  396

Query  438  YCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYFQGLHPDLASISFGDDFNPELNGIGFQQ  497
                   +G  +Y +E G  + I  + P   Y QG+  D       D + PE   +  Q+
Sbjct  397  -------NGFKHYFEEHGYIIGIMSITPRSGYQQGVPRDFTKFDNMDFYFPEFAHLSEQE  449

Query  498  VPRHRF  503
            +     
Sbjct  450  IKNQEL  455


>gi|649569140|gb|KDS75238.1| capsid family protein, partial [Parabacteroides distasonis str. 
3999B T(B) 6]
Length=390

 Score = 62.4 bits (150),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 90/398 (23%), Positives = 151/398 (38%), Gaps = 63/398 (16%)

Query  200  PPSFKFNGAPFFAYFL--SHYYYIANMQEKYMYFTRGVGEMQRVRPDGQQESLYRPFFSD  257
            P  FK +  PF AY L  + YY   N+  + +  T   G  Q        +   R +  D
Sbjct  2    PAGFKVSALPFRAYHLIYNEYYRDQNLTSE-LEITLDSGNYQLPVNSSLWQLHRRAWEKD  60

Query  258  VFTSFKPDDFLLYLDTLSYRTRVGAEIDALTLQLEG---IPINCVQAMACAGIQGYGGLL  314
             FTS  P              + G E+   T+ + G   IP+   +  A   I  +    
Sbjct  61   YFTSALP------------WVQRGPEV---TVPINGGGEIPVEMKEGFAAQKITTFPDRK  105

Query  315  SVPYSPDLFS--NIIKQGSSPAVEIEVMNALD---ASTDTGFSVAVPELRLKTKLQNWMD  369
             +  S  L+S  +++  G   +++ + +   D    +TD    V + ++R    LQ W +
Sbjct  106  PISGSEVLYSAPSVLSYGQIGSIKGQALIEPDNFVVNTDQ-MGVNINDIRTSNALQRWFE  164

Query  370  RLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLGVWQASINPSNVRAMANGSASGEDANLG  429
            R   SG R  +   + +GV+SS   + +P FLG  +  I+ S V   ++  ++   AN+ 
Sbjct  165  RNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQANMA  224

Query  430  --QLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYFQGLHPDLASISFGDDFN  487
               ++A V+         G   Y +E G  M I  + P   Y QG+  D       D + 
Sbjct  225  GHGISAGVNH--------GFTRYFEEHGYIMGIMSIRPRTGYQQGVPKDFRKFDNMDFYF  276

Query  488  PELNGIGFQQVPRHRFTMMPRGMDDITAHQEKNPWLGYAGTGVTIDPNMASVGEEVAWSW  547
            PE   +G Q++      +                         +   N  + G    ++ 
Sbjct  277  PEFAHLGEQEIKNEELYL-----------------------NESDAANEGTFGYTPRYAE  313

Query  548  LRTDYPRLHGDFAQNGNYQYWVLARPFTSYFPDAGTGF  585
             +     +HGDF   GN  +W L R F    P+  T F
Sbjct  314  YKYSQNEVHGDF--RGNMAFWHLNRIFKEK-PNLNTTF  348


>gi|649557305|gb|KDS63784.1| capsid family protein [Parabacteroides distasonis str. 3999B 
T(B) 4]
 gi|649559156|gb|KDS65543.1| capsid family protein [Parabacteroides distasonis str. 3999B 
T(B) 6]
Length=245

 Score = 58.5 bits (140),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 58/235 (25%), Positives = 93/235 (40%), Gaps = 36/235 (15%)

Query  353  VAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLGVWQASINPSN  412
            V + ++R    LQ W +R   SG R  +   + +GV+SS   + +P FLG  +  I+ S 
Sbjct  3    VNINDIRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSE  62

Query  413  VRAMANGSASGEDANLG--QLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYF  470
            V   ++  ++   AN+    ++A V+         G   Y +E G  M I  + P   Y 
Sbjct  63   VLQTSSTDSTSPQANMAGHGISAGVNH--------GFTRYFEEHGYIMGIMSIRPRTGYQ  114

Query  471  QGLHPDLASISFGDDFNPELNGIGFQQVPRHRFTMMPRGMDDITAHQEKNPWLGYAGTGV  530
            QG+  D       D + PE   +G Q++                    KN  L    +  
Sbjct  115  QGVPKDFRKFDNMDFYFPEFAHLGEQEI--------------------KNEELYLNESDA  154

Query  531  TIDPNMASVGEEVAWSWLRTDYPRLHGDFAQNGNYQYWVLARPFTSYFPDAGTGF  585
                N  + G    ++  +     +HGDF   GN  +W L R F    P+  T F
Sbjct  155  A---NEGTFGYTPRYAEYKYSQNEVHGDF--RGNMAFWHLNRIFKEK-PNLNTTF  203


>gi|639237429|ref|WP_024568106.1| hypothetical protein [Elizabethkingia anophelis]
Length=546

 Score = 58.2 bits (139),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 42/169 (25%), Positives = 76/169 (45%), Gaps = 6/169 (4%)

Query  330  GSSPAVEIEVMNALDASTDTGFSVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVK  389
            G+S  V I+  + L     T     + +LR   KLQ W+++   +G R  +   + +GVK
Sbjct  275  GNSNPVNIDNSSNLGVDLKTASGSTINDLRRAFKLQEWLEKNARAGSRYAESILSFFGVK  334

Query  390  SSAPYVNKPDFLGVWQASINPSNVRAMANGSASGEDANLGQLAACVDRYCDFSGHSGIDY  449
            +S   + +P+FLG  +  I  S V   ++  ++    N+      V +   FS       
Sbjct  335  TSDGRLQRPEFLGGNKTPILISEVLQQSSTDSTTPQGNMAGHGISVGKEGGFSK------  388

Query  450  YAKEPGTFMLIAMLVPEPAYFQGLHPDLASISFGDDFNPELNGIGFQQV  498
            + +E G  + +  ++P+ +Y QG+    +     D F P+   IG Q V
Sbjct  389  FFEEHGYVIGLMSVIPKTSYSQGIPRHFSKFDKFDYFWPQFEHIGEQPV  437


>gi|492501782|ref|WP_005867318.1| hypothetical protein [Parabacteroides distasonis]
 gi|409230408|gb|EKN23272.1| hypothetical protein HMPREF1059_03257 [Parabacteroides distasonis 
CL09T03C24]
Length=538

 Score = 57.8 bits (138),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 117/299 (39%), Gaps = 54/299 (18%)

Query  307  IQGYGGLLSVPYSPDLFSNIIKQ---GSSPAVEIEVMN-ALDASTDTG------------  350
            IQG GG L V    D  ++  +     + PA  ++++  AL A    G            
Sbjct  232  IQGSGGNLDVTLKNDAHADTYRMPGTSNRPAGAMQLVGGALIAGGTDGAYLEPDNFQVNV  291

Query  351  --FSVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLGVWQASI  408
                V++ +LR    LQ W +R   SG R  +   + +GV+SS   + +P FLG  +  I
Sbjct  292  DELGVSINDLRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPI  351

Query  409  NPSNVRAMANGSASGEDANLG--QLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPE  466
            + S V   +   ++   AN+    ++A V+         G   Y +E G  + I  + P 
Sbjct  352  SVSEVLQTSATDSTSPQANMAGHGISAGVNH--------GFKRYFEEHGYIIGIMSIRPR  403

Query  467  PAYFQGLHPDLASISFGDDFNPELNGIGFQQVPRHRFTMMPRGMDDITAHQEKNPWLGYA  526
              Y QG+  D       D + PE   +G Q++            +++   Q         
Sbjct  404  TGYQQGVPKDFRKFDNMDFYFPEFAHLGEQEIKN----------EEVYLQQ---------  444

Query  527  GTGVTIDPNMASVGEEVAWSWLRTDYPRLHGDFAQNGNYQYWVLARPFTSYFPDAGTGF  585
                T   N  + G    ++  +     +HGDF   GN  +W L R F S  P+  T F
Sbjct  445  ----TPASNNGTFGYTPRYAEYKYSMNEVHGDF--RGNMAFWHLNRIF-SESPNLNTTF  496


>gi|444297909|dbj|GAC77759.1| major capsid protein, partial [uncultured marine virus]
Length=257

 Score = 52.0 bits (123),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 75/176 (43%), Gaps = 12/176 (7%)

Query  334  AVEIEVMNALDASTDTGFSVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAP  393
            +V IE +      +D   +V   +LRL  ++Q W++    +G R  +     WGV+SS  
Sbjct  26   SVRIENLEGTQQISDADLTV--NDLRLAIRIQEWLEVNARAGSRYVEHLLAHWGVRSSDA  83

Query  394  YVNKPDFLGVWQASINPSNVRAMANGSASGE----DANLGQLAACVDRYCDFSGHSGIDY  449
             +++P++LG  +  +  S V + A  +   E     AN+      V       G +    
Sbjct  84   RLDRPEYLGGGKQPVLVSEVLSTAEVAIDQEISIPQANMAGHGISV------GGSNRFKK  137

Query  450  YAKEPGTFMLIAMLVPEPAYFQGLHPDLASISFGDDFNPELNGIGFQQVPRHRFTM  505
              +E G  + I  ++P  AY QG+    +     D + PE   +G Q V  +   M
Sbjct  138  RFEEHGHILGIMSVIPRTAYQQGVDRSFSREDKFDYYFPEFAHLGEQSVNNYEVYM  193


>gi|599087685|gb|AHN52768.1| major capsid protein, partial [uncultured Gokushovirinae]
Length=228

 Score = 50.4 bits (119),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 40/149 (27%), Positives = 68/149 (46%), Gaps = 4/149 (3%)

Query  352  SVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLGVWQASINPS  411
            S  + ++RL  + Q  ++R   SG R  +  +  WGV S    + + +FLG   + +  S
Sbjct  83   SANINDIRLAFQTQRLLERDARSGTRYVEALKAHWGVTSPDFRLQRAEFLGGGSSVVQLS  142

Query  412  NVRAMANGSASGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYFQ  471
             V+  +  +   ED  +G LAA        SG    +    E G  +++  +  + +Y Q
Sbjct  143  PVQQQSAQTTPAEDDKVGNLAAN----GTVSGTHSWNKSFVEHGVVIILGNIRGDISYSQ  198

Query  472  GLHPDLASISFGDDFNPELNGIGFQQVPR  500
            G+    +  +  D F P L+GIG Q VP 
Sbjct  199  GIDRYWSKSTRYDFFYPVLSGIGEQSVPE  227


>gi|599087681|gb|AHN52766.1| major capsid protein, partial [uncultured Gokushovirinae]
Length=226

 Score = 50.1 bits (118),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (46%), Gaps = 4/148 (3%)

Query  352  SVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGVKSSAPYVNKPDFLGVWQASINPS  411
            S  + ++RL  + Q  ++R   SG R  +  +  WGV S    + + +FLG   + +  S
Sbjct  83   SANINDIRLAFQTQRLLERDARSGTRYVEALKAHWGVTSPDFRLQRAEFLGGGSSVVQLS  142

Query  412  NVRAMANGSASGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYFQ  471
             V+  +  +   ED  +G LAA        SG    +    E G  +++  +  + +Y Q
Sbjct  143  PVQQQSAQTTPAEDDKVGNLAAN----GTVSGTHSWNKSFVEHGVVIILGNIRGDISYSQ  198

Query  472  GLHPDLASISFGDDFNPELNGIGFQQVP  499
            G+    +  +  D F P L+GIG Q VP
Sbjct  199  GIDRYWSKSTRYDFFYPVLSGIGEQSVP  226



Lambda      K        H        a         alpha
   0.321    0.140    0.442    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 4823816581056