bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-8_CDS_annotation_glimmer3.pl_2_2

Length=65
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr...  30.8    1e-04
  Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical....  28.1    0.001
  Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p...  27.3    0.002
  Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.p...  27.3    0.003
  Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical....  24.6    0.036
  Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical....  24.3    0.039


> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52

 Score = 30.8 bits (68),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 13/19 (68%), Positives = 17/19 (89%), Gaps = 0/19 (0%)

Query  14  LISTFVIGIITTLFVQSCT  32
           +I+TF+IG+IT L VQSCT
Sbjct  1   MIATFIIGVITALTVQSCT  19


> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65

 Score = 28.1 bits (61),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 22/32 (69%), Positives = 26/32 (81%), Gaps = 0/32 (0%)

Query  1   MKIAPNQWIEIVKLISTFVIGIITTLFVQSCT  32
           MKI  NQW+EI++ IST +I IITTL VQSCT
Sbjct  1   MKITSNQWVEIIRAISTAIIAIITTLCVQSCT  32


> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68

 Score = 27.3 bits (59),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 22/32 (69%), Positives = 26/32 (81%), Gaps = 0/32 (0%)

Query  1   MKIAPNQWIEIVKLISTFVIGIITTLFVQSCT  32
           MKI  NQW+EI++ IST +I IITTL VQSCT
Sbjct  1   MKITGNQWVEIIRAISTAIIAIITTLCVQSCT  32


> Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.protein
Length=64

 Score = 27.3 bits (59),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 0/25 (0%)

Query  8   WIEIVKLISTFVIGIITTLFVQSCT  32
           W EI+++I T +  ++T L  QSCT
Sbjct  6   WKEIIRIIVTVLTALLTALGAQSCT  30


> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68

 Score = 24.6 bits (52),  Expect = 0.036, Method: Compositional matrix adjust.
 Identities = 21/32 (66%), Positives = 25/32 (78%), Gaps = 0/32 (0%)

Query  1   MKIAPNQWIEIVKLISTFVIGIITTLFVQSCT  32
           MKI   QW+EI++ IST +I IITTL VQSCT
Sbjct  1   MKITGTQWVEIIRAISTAIIAIITTLCVQSCT  32


> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67

 Score = 24.3 bits (51),  Expect = 0.039, Method: Compositional matrix adjust.
 Identities = 21/32 (66%), Positives = 25/32 (78%), Gaps = 0/32 (0%)

Query  1   MKIAPNQWIEIVKLISTFVIGIITTLFVQSCT  32
           MKI   QW+EI++ IST +I IITTL VQSCT
Sbjct  1   MKITGTQWVEIIRAISTAIIAIITTLCVQSCT  32



Lambda      K        H        a         alpha
   0.331    0.141    0.421    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3675489