bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_6
Length=168
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 71.6 1e-17
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 52.4 5e-11
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 47.8 6e-10
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 40.0 5e-07
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 37.4 5e-06
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 32.3 0.001
Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.... 30.0 0.002
Alpavirinae_Human_feces_A_032_Microviridae_AG0217_putative.VP1 28.1 0.035
Alpavirinae_Human_feces_A_016_Microviridae_AG001_putative.VP1 23.1 1.7
Gokush_Bourget_309_Microviridae_AG0291_putative.VP3 22.3 2.2
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 71.6 bits (174), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 2/110 (2%)
Query 45 TEPFRFEKVGTEENEAVRVRSDVSMLLHAADMAKKYGTGFVKSMIEMHRPKSSGLQSEMD 104
TE R E T+ + VR SD+ ++LH D+A + G V S + S +Q MD
Sbjct 46 TEQLRVEIDDTDASRPVRYTSDIRLILHNKDLASRAGVD-VASKFGQSKQSPSQIQQIMD 104
Query 105 LMSDAQILDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEASRIALERESA 154
MSD +L T++SR++QSPSE++AWS+ L A+++E +A + +E E+A
Sbjct 105 TMSDEDLLATVRSRYIQSPSEILAWSKELSAYAENLESQAQEL-IEAENA 153
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 52.4 bits (124), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (52%), Gaps = 9/120 (8%)
Query 44 PTEPFRFEKVGTEENEAVRVRSDVSMLLHAADMAKKYGTGFVKSMIEMHRPKSSGLQSEM 103
P E R+ K +++ +R SDV++L++A + + G ++I +PK S ++
Sbjct 32 PVEMLRYVK---DDDGVIRYVSDVNLLMNAERLRNQIGEESYLNLIRGIQPKKSPYDNKY 88
Query 104 DLMSDAQILDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEASRIALERESAGTPQEPNSS 163
+D Q+ IKSR +Q+PSE++AW E L SI E + ES T Q+ ++
Sbjct 89 ---TDEQLFTAIKSRFIQTPSEVLAWIESLGSAGDSIRSELDALT---ESVQTNQQSEAT 142
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 47.8 bits (112), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 22/45 (49%), Positives = 33/45 (73%), Gaps = 0/45 (0%)
Query 103 MDLMSDAQILDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEASRI 147
MD MSD +L T++SRH+Q+PSE+IAWS+ L A+ +E +A +
Sbjct 1 MDTMSDDDLLATVRSRHIQAPSEIIAWSKELSAYAEHLESQAQEL 45
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 40.0 bits (92), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/37 (49%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
Query 112 LDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEASRIA 148
++TIKSR+LQSPSE+ AW E L+D+A + + I
Sbjct 1 METIKSRYLQSPSEVRAWLETLVDKADVVRSDYETIV 37
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 37.4 bits (85), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/29 (59%), Positives = 23/29 (79%), Gaps = 0/29 (0%)
Query 115 IKSRHLQSPSELIAWSEYLIDQAKSIEDE 143
IK R++QS +EL AWSE+L D+AK I+ E
Sbjct 4 IKPRNVQSHAELKAWSEFLTDKAKEIQTE 32
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 32.3 bits (72), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query 94 PKSSGLQSEMDLMSDAQILDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEASRIA 148
P+SS + D +LD K R++QS +E+ +W ++L+ + +S+E + A
Sbjct 131 PRSSNYTRNYN---DDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQAYA 182
> Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.protein
Length=62
Score = 30.0 bits (66), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (71%), Gaps = 0/34 (0%)
Query 112 LDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEAS 145
++ K R++QS +E+ AW E+LI + +S+E + +
Sbjct 1 MEYCKDRNIQSYTEMQAWLEHLISEGQSLEGDVA 34
> Alpavirinae_Human_feces_A_032_Microviridae_AG0217_putative.VP1
Length=657
Score = 28.1 bits (61), Expect = 0.035, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 43/92 (47%), Gaps = 22/92 (24%)
Query 85 VKSMIEMHRPKSSGLQSEMDLMSDAQILDTIKSRHLQSPSELI----AWSEYLIDQAKSI 140
+K+M ++H+P+ G+ + DL+S+ + L +P++ I AW Y+ D K+
Sbjct 531 LKTMDDLHKPQLDGIGYQ-DLLSN-------QMNGLANPTDAIGKQPAWLNYMTDVNKTY 582
Query 141 EDEAS----------RIALERESAGTPQEPNS 162
D A+ RI E GT P++
Sbjct 583 ADFAAGETESYMVLNRIYDVNEETGTIINPST 614
> Alpavirinae_Human_feces_A_016_Microviridae_AG001_putative.VP1
Length=657
Score = 23.1 bits (48), Expect = 1.7, Method: Composition-based stats.
Identities = 12/53 (23%), Positives = 28/53 (53%), Gaps = 5/53 (9%)
Query 87 SMIEMHRPKSSGLQSEMDLMSDAQILDTIKSRHLQ----SPSELIAWSEYLID 135
+M ++H+P G+ + DLM++ + T + +P + +AW +Y+ +
Sbjct 527 TMDDLHKPALDGIGYQ-DLMNEQRAWWTATQNGTKITDTTPGKSVAWIDYMTN 578
> Gokush_Bourget_309_Microviridae_AG0291_putative.VP3
Length=139
Score = 22.3 bits (46), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query 115 IKSRHLQSPSELIAWSEYLIDQAKSIEDEASRIAL 149
+++R SP E + E+ D A + DEA R+ L
Sbjct 89 VRARFHNSPQEFL---EFFADPANA--DEAVRLGL 118
Lambda K H a alpha
0.312 0.127 0.359 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 11677680