bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-34_CDS_annotation_glimmer3.pl_2_1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1 155 1e-44
Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1 145 5e-41
Alpavirinae_Human_feces_E_011_Microviridae_AG0388_putative.VP1 135 2e-37
Alpavirinae_Human_feces_D_031_Microviridae_AG0425_putative.VP1 134 3e-37
Alpavirinae_Human_feces_D_008_Microviridae_AG098_putative.VP1 130 2e-35
Alpavirinae_Human_gut_33_005_Microviridae_AG0184_putative.VP1 126 3e-34
Alpavirinae_Human_feces_A_021_Microviridae_AG077_putative.VP1 126 4e-34
Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1 119 1e-31
Alpavirinae_Human_feces_A_034_Microviridae_AG0105_putative.VP1 117 4e-31
Alpavirinae_Human_feces_C_043_Microviridae_AG0322_putative.VP1 116 9e-31
> Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1
Length=614
Score = 155 bits (393), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 150/305 (49%), Gaps = 24/305 (8%)
Query 3 LLKLASTGLQLVGFSGKLTADAS-----MKISALRSATALQKYKEIQNSNDPDFAAQVLA 57
L L ++ V KL D S + ALR A ALQ++KEI S D D+ Q+L
Sbjct 324 LFALDASTSNPVSVGSKLHLDLSSIKSQFNVLALRQAEALQRWKEISQSGDSDYREQILK 383
Query 58 HFGIK-PKVDSRVSVFIGGDDKTLSINPQVNTNFQNGGEPEIKA-IGIGDLSAGCKFTST 115
HFG+K P+ S + +IGG + L I+ VN N + + A G+G + +T+
Sbjct 384 HFGVKLPQALSNLCTYIGGISRNLDISEVVNNNLAAEEDTAVIAGKGVGTGNGSFTYTTN 443
Query 116 TYGMIIGIYRAIPQLDYSHVGIDRNLFKTDASDFPIPELDSIGMQTQYRCEL-SAPLMGL 174
+ +I+GIY A+P LDY+ G D L TDA PIPE D+IG++ ++ ++ L
Sbjct 444 EHCVIMGIYHAVPLLDYTLTGQDGQLLVTDAESLPIPEFDNIGLEVLPMAQIFNSSLATA 503
Query 175 NDLLVPYGYQTSPLDMSVTYGYSPRYAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWR 234
+L GY+PRY K+ D G F T +WV+ ES LSGW
Sbjct 504 FNLF--------------NAGYNPRYFNWKTKLDVINGAFTTTLKSWVSPVSESLLSGWA 549
Query 235 RNRGSVSVTDYDSIED--LFKCRASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSM 292
R S S T ++ + FK S+L PIF + T + D+LL+ S C VR S
Sbjct 550 RFGASDSKTGTKAVLNYKFFKVNPSVLDPIFGVKADSTWDTDQLLVNSYIGCYVVRNLSR 609
Query 293 YGLPY 297
G+PY
Sbjct 610 DGVPY 614
> Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1
Length=607
Score = 145 bits (366), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 139/281 (49%), Gaps = 21/281 (7%)
Query 24 ASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIK-PKVDSRVSVFIGGDDKTLSI 82
+ + ALR A ALQ++KEI S D D+ Q+ HFG+ P+ S + +IGG + L I
Sbjct 341 SQFTVLALRQAEALQRWKEISQSGDSDYREQIRKHFGVNLPQALSNMCTYIGGISRNLDI 400
Query 83 NPQVNTNFQNGGEPEIKA-IGIGDLSAGCKFTSTTYGMIIGIYRAIPQLDYSHVGIDRNL 141
+ VN N G+ + A G+G + +T+ + +++ IY A+P LDY+ G D L
Sbjct 401 SEVVNNNLAAEGDTAVIAGKGVGAGNGSFTYTTNEHCVVMCIYHAVPLLDYTITGQDGQL 460
Query 142 FKTDASDFPIPELDSIGMQTQYRCEL-SAPLMGLNDLLVPYGYQTSPLDMSVTYGYSPRY 200
TDA PIPE D+IGM+T ++ ++P + +L GY+PRY
Sbjct 461 LVTDAESLPIPEFDNIGMETLPMTQIFNSPKASIVNLF--------------NAGYNPRY 506
Query 201 AELKSARDYYEGGFCGTYSTWVTGYDESFLSGW---RRNRGSVSVTDYDSIE-DLFKCRA 256
K+ D G F T +WV+ ES LSGW + G V+ + + FK
Sbjct 507 FNWKTKLDVINGAFTTTLKSWVSPVTESLLSGWFGFGYSEGDVNSQNKVVLNYKFFKVNP 566
Query 257 SLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
S+L PIF T + D+LL+ S C R S G+PY
Sbjct 567 SVLDPIFGVAADSTWDSDQLLVNSYIGCYVARNLSRDGVPY 607
> Alpavirinae_Human_feces_E_011_Microviridae_AG0388_putative.VP1
Length=622
Score = 135 bits (339), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/282 (36%), Positives = 134/282 (48%), Gaps = 28/282 (10%)
Query 24 ASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIK-PKVDSRVSVFIGGDDKTLSI 82
AS I ALR A ALQK+KEI S D ++ Q+ AHFGI P S ++ +IGG + L I
Sbjct 361 ASFSILALRQAEALQKWKEITQSVDTNYRDQIKAHFGINTPASMSHMAQYIGGVARNLDI 420
Query 83 NPQVNTNFQN-GGEPEIKAIGIGDLSAGCKF-TSTTYGMIIGIYRAIPQLDYSHVGIDRN 140
+ VN N ++ G E I G+G S ++ T + Y +I+ IY A+P LDY+ G D
Sbjct 421 SEVVNNNLKDDGSEAVIYGKGVGSGSGKMRYHTGSQYCIIMCIYHAMPLLDYAITGQDPQ 480
Query 141 LFKTDASDFPIPELDSIGMQTQYRCELSAPLM----GLNDLLVPYGYQTSPLDMSVTYGY 196
L T D PIPE D+IGM+ L ++ +ND L GY
Sbjct 481 LLCTSVEDLPIPEFDNIGMEAVPATTLFNSVLFDGTAVNDFL----------------GY 524
Query 197 SPRYAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRGSVSVTDYDSIE-DLFKCR 255
+PRY KS D G F T WV D+ +L W ++ S SI FK
Sbjct 525 NPRYWPWKSKIDRVHGAFTTTLKDWVAPIDDDYLHNWFNSKDGKSA----SISWPFFKVN 580
Query 256 ASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
+ L IF D+LLI +C VRP S G+PY
Sbjct 581 PNTLDSIFAVVADSIWETDQLLINCDVSCKVVRPLSQDGMPY 622
> Alpavirinae_Human_feces_D_031_Microviridae_AG0425_putative.VP1
Length=614
Score = 134 bits (338), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/283 (35%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query 24 ASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIK-PKVDSRVSVFIGGDDKTLSI 82
+S I LR A A+QKY+E+ D D Q++AHFG+ V S V++GG + +
Sbjct 347 SSFSILQLRMAEAVQKYREVSQFADQDARGQIMAHFGVSLSPVLSDKCVYLGGSSSNIDL 406
Query 83 NPQVNTNFQNGGEPEI--KAIGIGDLSAGCKFTSTTYGMIIGIYRAIPQLDYSHVGIDRN 140
+ VNTN EI K +G G S +F YG+IIGIY +P LDY G +N
Sbjct 407 SEVVNTNITGDNVAEIAGKGVGTGQGSFSGQFDE--YGIIIGIYHNVPLLDYVITGQPQN 464
Query 141 LFKTDASDFPIPELDSIGMQTQYRCELSAPLMGLNDLLVPYGYQTSPLDMSV-TYGYSPR 199
L T+ +D P PE DSIGMQT +N V + TS +D V T GY PR
Sbjct 465 LLYTNTADLPFPEFDSIGMQTIQFGRF------VNSKSVSW---TSGVDYRVQTMGYLPR 515
Query 200 YAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRGSVSVTDYDSIE-----DLFKC 254
+ ++K+ D G F T WV D S++S W ++ SVT + FK
Sbjct 516 FFDVKTRYDEVLGAFRSTLKNWVAPLDPSYVSKWLQS----SVTSSGKLALNLNYGFFKV 571
Query 255 RASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
+L IF + T++ D+ L AVR F G+PY
Sbjct 572 NPRVLDSIFNVKCDSTIDTDQFLTALYMDIKAVRNFDYDGMPY 614
> Alpavirinae_Human_feces_D_008_Microviridae_AG098_putative.VP1
Length=618
Score = 130 bits (326), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/278 (33%), Positives = 134/278 (48%), Gaps = 14/278 (5%)
Query 24 ASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIK-PKVDSRVSVFIGGDDKTLSI 82
+S I LR A A+QKY+E+ D D Q++AHFG+ V S +++GG + +
Sbjct 351 SSFSILQLRMAEAVQKYREVSQFADQDARGQIMAHFGVSLSPVLSDKCMYLGGSSSNIDL 410
Query 83 NPQVNTNFQNGGEPEIKAIGIGDLSAGCKFTSTTYGMIIGIYRAIPQLDYSHVGIDRNLF 142
+ VNTN EI G+G TYG+I+GIY +P LDY G +NL
Sbjct 411 SEVVNTNITGDNIAEIAGKGVGTGQGSFSGNFDTYGIIMGIYHNVPLLDYVITGQPQNLL 470
Query 143 KTDASDFPIPELDSIGMQT-QYRCELSAPLMGLNDLLVPYGYQTSPLD-MSVTYGYSPRY 200
T+ +D P PE DSIGMQT Q+ +++ +G TS +D + T GY PR+
Sbjct 471 YTNTADLPFPEYDSIGMQTIQFGRFVNSKAVGW----------TSGVDYRTQTMGYLPRF 520
Query 201 AELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRGSVSVTDYDSIE-DLFKCRASLL 259
++K+ D G F T WV D + L W + + S + ++ FK +L
Sbjct 521 FDVKTRYDEVLGAFRSTLKNWVAPLDPANLPQWLQTSVTSSGKLFLNLNYGFFKVNPRVL 580
Query 260 YPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
IF + T++ D+ L AVR F G+PY
Sbjct 581 DSIFNVKCDSTIDTDQFLTTLYMDIKAVRNFDYDGMPY 618
Score = 21.9 bits (45), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
Query 230 LSGWRRNRGSVSVTD------YDSIEDLFKCRASLLYPIFVNQWSGTVNDDKLLIG 279
L+G+ RGSVS +D +DSI K L+Y + N S V D++ IG
Sbjct 128 LTGFADVRGSVSSSDIENFLGFDSITQSAKL---LMYLRYGNFLSSVVPDEQKSIG 180
> Alpavirinae_Human_gut_33_005_Microviridae_AG0184_putative.VP1
Length=618
Score = 126 bits (316), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 140/287 (49%), Gaps = 22/287 (8%)
Query 16 FSGKLTADASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIKPK-VDSRVSVFIG 74
SG+L DA + LR+A LQK+KEI +N ++AAQV AHFG+ P + S S +
Sbjct 349 LSGQL--DAKFSVLQLRAAECLQKWKEIAQANGQNYAAQVKAHFGVSPNPITSHRSTRVC 406
Query 75 GDDKTLSINPQVNTNFQNGGEPEIKAIGIG--DLSAGCKFTSTTYGMIIGIYRAIPQLDY 132
G D ++ I+ NTN + E I+ GIG ++ F +T +G+++ IY A+P LDY
Sbjct 407 GFDGSIDISAVENTNLSS-DEAIIRGKGIGGYRVNKPETFETTEHGVLMCIYHAVPLLDY 465
Query 133 SHVGIDRNLFKT-DASDFPIPELDSIGMQTQYRCEL-SAPLMGLNDLLVPYGYQTSPLDM 190
+ G D T D +P+PE+DSIG + EL S L+ N + P+
Sbjct 466 APTGPDLQFMTTVDGDSWPVPEMDSIGFE-----ELPSYSLLNTNAV--------QPIKE 512
Query 191 SVTYGYSPRYAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRGSVSVTDYDSIED 250
+GY PRY K++ D G F T +W + +L + N +V +
Sbjct 513 PRPFGYVPRYISWKTSVDVVRGAFIDTLKSWTAPIGQDYLKIYFDNN-NVPGGAHFGFYT 571
Query 251 LFKCRASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
FK S++ PIF G+ N D+LL+ R S GLPY
Sbjct 572 WFKVNPSVVNPIFGVVADGSWNTDQLLVNCDFDVRVARNLSYDGLPY 618
> Alpavirinae_Human_feces_A_021_Microviridae_AG077_putative.VP1
Length=622
Score = 126 bits (316), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 135/284 (48%), Gaps = 19/284 (7%)
Query 25 SMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIK-PKVDSRVSVFIGGDDKTLSIN 83
+ I ALR A LQK+KEI S D D+ +Q+ HFG+K P S +S +IGG + I+
Sbjct 347 AFSILALRQAEFLQKWKEIALSGDQDYRSQIEKHFGVKLPAELSYMSQYIGGQFAQMDIS 406
Query 84 PQVNTNF--QNGGEPE-----IKAIGIGDLSAGCKFTSTTYGMIIGIYRAIPQLDYSHVG 136
VN N Q G + I G+ +T+ +G+I+GIY A+P LDY G
Sbjct 407 EVVNQNLTDQAGSDAAQYPALIAGKGVNSGDGNVNYTARQHGIIMGIYHAVPLLDYERTG 466
Query 137 IDRNLFKTDASDFPIPELDSIGMQTQYRCEL--SAPLMGLNDLLVPYGYQTSPLDMSVTY 194
D++L T A ++ IPE D+IGMQT L S + G +D + +G +
Sbjct 467 QDQDLLITSAEEWAIPEFDAIGMQTLPLGTLFNSNKVSGDSDFRL-HG-------AAYPI 518
Query 195 GYSPRYAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRG-SVSVTDYDSIEDLFK 253
GY PRY K+ D G F + TWV D F++ W +N + S + FK
Sbjct 519 GYVPRYVNWKTDIDEIFGAFRSSEKTWVAPIDADFITNWVKNVADNASAVQSLFNYNWFK 578
Query 254 CRASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
++L IF + T++ D + + VR G+PY
Sbjct 579 VNPAILDDIFAVKADSTMDTDTFKTRMMMSIKCVRNLDYSGMPY 622
> Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1
Length=584
Score = 119 bits (297), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 134/290 (46%), Gaps = 20/290 (7%)
Query 12 QLVGFSGKLTADASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIKPKVD-SRVS 70
QL+ LT D + ALR ALQ+++EI ++ +Q+ AHFG+ + S +S
Sbjct 311 QLIEAGTNLTLD----VLALRRGEALQRFREISLCTPLNYRSQIKAHFGVDVGSELSGMS 366
Query 71 VFIGGDDKTLSINPQVNTNFQNGGEPEIKAIGIGDLSAGCKFTSTTYGMIIGIYRAIPQL 130
+IGG+ +L I+ VNTN E I GIG +F + +G+++ IY ++P L
Sbjct 367 TYIGGEASSLDISEVVNTNITESNEALIAGKGIGTGQGNEEFYAKDWGVLMCIYHSVPLL 426
Query 131 DYSHVGIDRNLFKTDASDFPIPELDSIGMQTQYRCELSAPLMGLNDLLVPY--GYQTSPL 188
DY D LF + + FP+PELD+IG++ ++ N + +P G +P
Sbjct 427 DYVISAPDPQLFASMNTSFPVPELDAIGLE-----PITVAYYSNNPIELPSTGGITDAP- 480
Query 189 DMSVTYGYSPRYAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRGSVSV-TDYDS 247
+ T GY PRY K++ DY G F T WV S + G+ +Y
Sbjct 481 --TTTVGYLPRYYAWKTSIDYVLGAFTTTEKEWVAPITPELWSNMLKPLGTKGTGINY-- 536
Query 248 IEDLFKCRASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
+ FK S+L PIF + D LI + R G+PY
Sbjct 537 --NFFKVNPSILDPIFAVNADSYWDTDTFLINAAFDIRVARNLDYDGMPY 584
> Alpavirinae_Human_feces_A_034_Microviridae_AG0105_putative.VP1
Length=618
Score = 117 bits (293), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/293 (33%), Positives = 134/293 (46%), Gaps = 34/293 (12%)
Query 16 FSGKLTADASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIKPK-VDSRVSVFIG 74
SG+L DA + LR+A ALQK+KEI +N ++AAQV AHFG+ + S S I
Sbjct 349 LSGQL--DAQFSVLQLRAAEALQKWKEIAQANGQNYAAQVKAHFGVSTNPMQSHRSTRIC 406
Query 75 GDDKTLSINPQVNTNFQNGGEPEIKAIGIG--DLSAGCKFTSTTYGMIIGIYRAIPQLDY 132
G D ++ I+ NTN E I+ G+G ++ FT +G+I+ IY A P LDY
Sbjct 407 GFDGSIDISAVENTNL-TADEAIIRGKGLGGQRINDPSDFTCNEHGVIMCIYHATPLLDY 465
Query 133 SHVGIDRNLFKT-DASDFPIPELDSIGMQTQYRCELSAPLMGLNDL-----LVPYGYQTS 186
G D L T +P+PE DS+GM+ S P++ L + +V Y
Sbjct 466 VPTGPDLQLMSTVKGESWPVPEFDSLGME-------SLPMLSLVNSKAIGDIVARSYA-- 516
Query 187 PLDMSVTYGYSPRYAELKSARDYYEGGFCGTYSTWVTGYDESFLSGWRRNRGSVSVTDYD 246
GY PRY K++ D G F T +W D ++ + G V +
Sbjct 517 --------GYVPRYISWKTSIDVVRGAFTDTLKSWTAPVDSDYMHVF---FGEVIPQEGS 565
Query 247 SIED--LFKCRASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
I FK S+L PIF G+ N D+LL R S G+PY
Sbjct 566 PILSYTWFKVNPSVLNPIFAVSVDGSWNTDQLLCNCQFDVKVARNLSYDGMPY 618
> Alpavirinae_Human_feces_C_043_Microviridae_AG0322_putative.VP1
Length=602
Score = 116 bits (290), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 20/282 (7%)
Query 21 TADASMKISALRSATALQKYKEIQNSNDPDFAAQVLAHFGIK-PKVDSRVSVFIGGDDKT 79
T AS I + R A A QK+KE+ + Q+ AHF +K + S +IGG
Sbjct 336 TLSASFDILSFRIAEATQKWKEVTQCAKQGYKEQLEAHFNVKLSEALSDHCRYIGGTSSG 395
Query 80 LSINPQVNTNFQNGGEPEIKAIGIGDLSAGCKFTSTTYGMIIGIYRAIPQLDYSHVGIDR 139
++I+ +NTN ++ +IK G+G F + +G+++ IY A P LDY G D
Sbjct 396 VTISEVLNTNLESAAA-DIKGKGVGGSFGSETFETNEHGILMCIYHATPVLDYLRSGQDL 454
Query 140 NLFKTDASDFPIPELDSIGMQTQYRCELSAPLMGLNDLLVPYGYQTSPLDMSV-TYGYSP 198
L T A+D PIPE D IGM+ + + L + + L S+ GYSP
Sbjct 455 QLLSTLATDIPIPEFDHIGMEA----------LPIETLFNEQSTEATALINSIPVLGYSP 504
Query 199 RYAELKSARDYYEGGFCGTYSTWV---TGYDESFLSGWRRNRGSVSVTDYDSIEDLFKCR 255
RY K++ D+ G F T +WV T ++ + + GSV +Y FK
Sbjct 505 RYIAYKTSVDWVSGAFETTLDSWVAPLTVNEQITKLLFNPDSGSVYSMNY----GFFKVT 560
Query 256 ASLLYPIFVNQWSGTVNDDKLLIGSVNTCVAVRPFSMYGLPY 297
+L PIFV + + T + D+ L+ V+ G+PY
Sbjct 561 PRVLDPIFVQECTDTWDSDQFLVNVSFNVKPVQNLDYNGMPY 602
Lambda K H a alpha
0.318 0.137 0.409 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 25026771