bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-18_CDS_annotation_glimmer3.pl_2_5
Length=334
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_016_Microviridae_AG0275_hypothetical.... 437 8e-155
Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2 48.5 3e-08
Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2 48.5 3e-08
Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypotheti... 40.4 1e-05
Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein... 35.4 4e-04
Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.... 34.3 0.001
Alpavirinae_Human_feces_D_022_Microviridae_AG0391_hypothetical.... 31.6 0.007
Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.p... 30.8 0.015
Gokush_Bourget_245_Microviridae_AG081_putative.VP2 30.0 0.019
Alpavirinae_Human_feces_A_033_Microviridae_AG0384_hypothetical.... 30.0 0.026
> Alpavirinae_Human_feces_C_016_Microviridae_AG0275_hypothetical.protein.HMPREF9141.0987
Length=335
Score = 437 bits (1123), Expect = 8e-155, Method: Compositional matrix adjust.
Identities = 241/332 (73%), Positives = 280/332 (84%), Gaps = 12/332 (4%)
Query 1 MSIlaglgaaaaSFAMKEGHNAIAQSRNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWR 60
MSILAGLGAAAASFAMKEGHNAIAQSRNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWR
Sbjct 1 MSILAGLGAAAASFAMKEGHNAIAQSRNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWR 60
Query 61 SAGIAPQAVFGNSPGGAGIVTDASTPNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATV 120
SAGIAPQAVFGNSPGGAGI TDAS+PNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATV
Sbjct 61 SAGIAPQAVFGNSPGGAGIATDASSPNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATV 120
Query 121 NKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQRAINEADV 180
+KLNAEA KLRGDTKDP VTKD Q+LEFDWN+VKKQREQVQL VDEI+KEF+RA+NEAD+
Sbjct 121 DKLNAEAGKLRGDTKDPKVTKDLQQLEFDWNIVKKQREQVQLDVDEIDKEFRRAVNEADL 180
Query 181 QIKHGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDLIESQISATQAQTDLIKaqtsatq 240
QIK G+YSETL+KIDKLIADK+VSEEM++NLQKQRDLI +QI +T+AQTDL KAQT ++
Sbjct 181 QIKRGIYSETLSKIDKLIADKEVSEEMRRNLQKQRDLIVAQIDSTKAQTDLSKAQTGLSK 240
Query 241 aqtETENALRDGRIKLTEREANKILADIGLSEARSLNE-YESLIK------AMTGTQPAS 293
AQT+TE+ LR GR++LT + ++L+ GL++ R E YE+ ++ A G + A
Sbjct 241 AQTKTEDDLRKGRVRLTGAQTTEVLSMAGLNDVRRDREKYETFLRLLDIDDASNGAEFAQ 300
Query 294 SLWGYIDRLIARGDSRLGGYENA--SDLREKL 323
+ I +L+ R ++ L Y+ SD EK+
Sbjct 301 RI---IRQLLGRFNTDLSDYKQKMISDYLEKI 329
> Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2
Length=364
Score = 48.5 bits (114), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/261 (31%), Positives = 119/261 (46%), Gaps = 43/261 (16%)
Query 62 AGIAPQAVFGNSPGGAGIVTDASTPNSQTPM-----GSSDFNFVTTIAERQRMKN---EK 113
+G A A G+ PG S P PM G+S + +RQ MKN +
Sbjct 99 SGSAQAAQGGDVPG--------SGPYQMNPMSALQSGASSI-IQNAMLDRQ-MKNADADI 148
Query 114 AIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQR 173
A+ DA K AEA +G T + ++ + ++ L K+ R ++ D++N EF +
Sbjct 149 ALKDAQRIKTLAEA---KGQTNENSLFEFARSAAESDALSKRFRAEL----DKVNAEFAQ 201
Query 174 AINEADVQIKHGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDL-----------IESQI 222
A EAD+ + L E +++ +A ++ + + RDL ESQ
Sbjct 202 AFAEADISQRKALLQEIWSRVKNNLAQAARTDADRLTIDTIRDLQAKALGAGISLTESQT 261
Query 223 SATQAQTDLIKaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLNEYESL 282
SATQAQT L +AQT ETEN LR R LT+ + N+I I S + E L
Sbjct 262 SATQAQTGLTQAQT-------ETENQLRKLRKALTQNQINEITQKIRSSRVVTAEGIERL 314
Query 283 IKAMTGTQPASSLWGYIDRLI 303
+ G + A SL+G ID+ I
Sbjct 315 TAWLRGDREAGSLFGLIDKYI 335
> Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2
Length=364
Score = 48.5 bits (114), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/261 (31%), Positives = 119/261 (46%), Gaps = 43/261 (16%)
Query 62 AGIAPQAVFGNSPGGAGIVTDASTPNSQTPM-----GSSDFNFVTTIAERQRMKN---EK 113
+G A A G+ PG S P PM G+S + +RQ MKN +
Sbjct 99 SGSAQAAQGGDVPG--------SGPYQMNPMSALQSGASSI-IQNAMLDRQ-MKNADADI 148
Query 114 AIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQR 173
A+ DA K AEA +G T + ++ + ++ L K+ R ++ D++N EF +
Sbjct 149 ALKDAQRIKTLAEA---KGQTNENSLFEFARSAAESDALSKRFRAEL----DKVNAEFAQ 201
Query 174 AINEADVQIKHGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDL-----------IESQI 222
A EAD+ + L E +++ +A ++ + + RDL ESQ
Sbjct 202 AFAEADISQRKALLQEIWSRVKNNLAQAARTDADRLTIDTIRDLQAKALGAGISLTESQT 261
Query 223 SATQAQTDLIKaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLNEYESL 282
SATQAQT L +AQT ETEN LR R LT+ + N+I I S + E L
Sbjct 262 SATQAQTGLTQAQT-------ETENQLRKLRKALTQNQINEITQKIRSSRVVTAEGIERL 314
Query 283 IKAMTGTQPASSLWGYIDRLI 303
+ G + A SL+G ID+ I
Sbjct 315 TAWLRGDREAGSLFGLIDKYI 335
> Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypothetical.protein.BACEGG.02723
Length=275
Score = 40.4 bits (93), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/77 (30%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query 18 EGHNAIAQS---RNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWRSAGIAPQAVFGNSP 74
+G N ++Q+ R ++N A++ +W N E N P Q+ +++ AG+ P ++G
Sbjct 18 QGFNTLSQAYGNRQQRNFAVK--FW----NMQNEYNLPINQMQRFKDAGLNPHLIYGQ-- 69
Query 75 GGAGIVTDASTPNSQTP 91
G AG + S P+ Q P
Sbjct 70 GNAGNASPISLPDRQDP 86
> Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein.BACEGG.02723
Length=266
Score = 35.4 bits (80), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query 50 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGI-VTDASTPNSQTP----MGSSDFNFVTTIA 104
N PS+Q+ +++ AG+ P ++G A I TD P+ P G N++
Sbjct 57 NSPSQQMQRYKEAGLNPNLIYGQMSNSAAIRSTDMKQPDFVAPKLQNTGQVMNNYIDLKL 116
Query 105 ERQRMKNEK 113
+ Q++ N+K
Sbjct 117 KEQQLSNDK 125
> Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.BACEGG.02723
Length=407
Score = 34.3 bits (77), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (31%), Positives = 39/78 (50%), Gaps = 7/78 (9%)
Query 50 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGIVTDASTPNSQTPMGSSDFNFVTTIAERQRM 109
N P +QVA+ R AG+ P + G G +S ++ +P +S + V T A+ M
Sbjct 100 NAPDQQVARMRQAGLNPYMMLGQVNSG----NQSSIASTSSPDLNSSVSNVNTAAQ---M 152
Query 110 KNEKAIADATVNKLNAEA 127
+ ++ A V +NAEA
Sbjct 153 IQQSSLVAAQVRDMNAEA 170
> Alpavirinae_Human_feces_D_022_Microviridae_AG0391_hypothetical.protein.BACEGG.02723
Length=367
Score = 31.6 bits (70), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 125/312 (40%), Gaps = 43/312 (14%)
Query 17 KEGHNAIAQSRNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWRSAGIAPQAVFGN---- 72
KE + +AQ +++N + YW ++ N P+ Q +AG+ P A G
Sbjct 49 KEYADYMAQLESQQN----NLYW-------DKYNSPAAQRRARVAAGLTPYADVGGIQTS 97
Query 73 --SPGGAGIVTDASTPNSQT---PMGSSDFNFVTTIAERQRMKNEKAIADATVNKLNAEA 127
PG G STP++Q+ P G V + A+A + ++A
Sbjct 98 SVDPGSYG----GSTPSAQSFTQPGGIPTSPLVGAFGNATQQTLSALQAEANIELTKSQA 153
Query 128 EKLRGDT---KDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQRAINEADVQIKH 184
K R +T ++ N D + +L KQ + + EI ++ A AD+ K
Sbjct 154 LKTRAETTGLENTNSMFDIVKSIASEDLTSKQFNNI---LKEIETKYAEANAIADLDTKQ 210
Query 185 GLYSET-------LAKIDKLIADKDVSEEM----KQNLQKQRDLIESQISATQAQTDL-I 232
E LA K AD+ E + K++L+ L E+Q +AT+ L +
Sbjct 211 AKIGEINASALERLASAAKTDADRITVELLRDAQKRSLEAGASLAEAQ-AATEPHRALNL 269
Query 233 KaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLNEYESLIKAMTGTQPA 292
K T AQ ETE LR + +LT ++A + + E L + +
Sbjct 270 KQDTLLKMAQEETEQLLRSQKFELTRQQARAAAMSFVQERILTYRQAEELARYLANIHDP 329
Query 293 SSLWGYIDRLIA 304
++W I RL++
Sbjct 330 KNMWDGIWRLVS 341
> Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.protein.BACEGG.02723
Length=383
Score = 30.8 bits (68), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 23/104 (22%)
Query 42 RVNQLEE--MNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIV---------------TDAS 84
R N +E N PS +++ + AG+ P ++GN G AG+V D +
Sbjct 70 RANLADERSYNSPSTVMSRLKDAGLNPDLIYGN--GAAGLVDSNVAGTAPVSSVPPADVA 127
Query 85 TPNSQTPMGSSDF----NFVTTIAERQRMKNEKAIADATVNKLN 124
P TP + T+AE + +K + + + V LN
Sbjct 128 GPIMATPTAMESLFQGAAYAKTLAETKNIKADTSKKEGEVTSLN 171
> Gokush_Bourget_245_Microviridae_AG081_putative.VP2
Length=242
Score = 30.0 bits (66), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/129 (21%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query 54 RQVAKWRSAGIAPQAVF---GNSPGGAGIVTDASTPNSQTPM-GSSDFNFVTTIAERQRM 109
RQV +SAG+ P + G + AG A +P+ G++ + + A +
Sbjct 61 RQVEDMKSAGLNPMLAYIKGGGASSPAGSTGQAVNAQYTSPIQGAASYRLTSAQAAK--- 117
Query 110 KNEKAIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINK 169
EAEK + + + N+ K S++++ + + +K +E+++ + + +
Sbjct 118 ---------------TEAEKPKVEAETSNIVKTSEKIDQEISNLKTDQERIKAVILNLAE 162
Query 170 EFQRAINEA 178
E Q IN+
Sbjct 163 ERQNLINQG 171
> Alpavirinae_Human_feces_A_033_Microviridae_AG0384_hypothetical.protein.BACEGG.02723
Length=367
Score = 30.0 bits (66), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 77/314 (25%), Positives = 129/314 (41%), Gaps = 47/314 (15%)
Query 17 KEGHNAIAQSRNEKNMALEHDYWKRRVNQLEEMNKPSRQVAKWRSAGIAPQAVFGN---- 72
KE + +AQ ++N + YW E+ N P+ Q +AG+ P A G
Sbjct 49 KEYADYLAQIETQQN----NLYW-------EKYNSPAAQRRARVAAGLTPYADVGGIQTS 97
Query 73 --SPGGAGIVTDASTPNSQT---PMGSSDFNFVTTIAERQRMKNEKAIADATVNKLNAEA 127
PG G STP++Q+ P G V + A+A + ++A
Sbjct 98 SVDPGSYG----GSTPSAQSFSQPGGIPINPLVGAFGNATQQTLSALQAEANIELTKSQA 153
Query 128 EKLRGDT---KDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQRAINEADVQIKH 184
K R +T ++ N D + +L K+ + + E+ + A AD+ K
Sbjct 154 LKTRAETTGLENTNSMFDIVKSIAREDLTSKRFGNI---LKEVESRYAEANAIADLDTKQ 210
Query 185 GLYSET-------LAKIDKLIADKDVSEEM----KQNLQKQRDLIESQISATQAQTDL-I 232
+E LA K AD+ E + K++L+ L E+Q +AT+ L +
Sbjct 211 AKIAEINASVLERLASAAKTDADRITVELLRDAQKRSLEAGASLAEAQ-AATEPHKALNL 269
Query 233 KaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLN--EYESLIKAMTGTQ 290
K T AQ ETE LR + +LT ++A LA + + R L + E L + +
Sbjct 270 KQDTLLKMAQEETEQLLRSQKFELTRQQAR--LAAMSFVQERILTYRQAEELARYLANIH 327
Query 291 PASSLWGYIDRLIA 304
++W I R+++
Sbjct 328 DPKNMWDGIWRIVS 341
Lambda K H a alpha
0.311 0.126 0.343 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 28557990