bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_3

Length=47
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_SectLung2LLL_002_Microviridae_AG0242_putative.VP3            19.2    2.3


> Gokush_SectLung2LLL_002_Microviridae_AG0242_putative.VP3
Length=165

 Score = 19.2 bits (38),  Expect = 2.3, Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 11/54 (20%)

Query  5    EVVIALPNGVKIACTAKSAKYL-----------IIGLGLESLLKDGEVEKPADK  47
            E+ + LP+GV+       A++L           +  +GL +  K+G +E  + K
Sbjct  91   ELFMQLPSGVRTKFNNNPAEFLDFCGDEDNLEELQEMGLANAPKEGSIETRSKK  144



Lambda      K        H        a         alpha
   0.314    0.135    0.371    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3670407