bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-16_CDS_annotation_glimmer3.pl_2_3
Length=70
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.... 32.7 3e-05
Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.p... 32.7 3e-05
Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.... 32.3 4e-05
Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.... 31.6 8e-05
Gokush_Bourget_224_Microviridae_AG0245_putative.VP1 22.7 0.35
Gokush_Bourget_164_Microviridae_AG044_putative.VP1 22.3 0.52
Gokush_Bourget_154_Microviridae_AG0430_putative.VP1 21.9 0.67
Gokush_Bourget_052_Microviridae_AG0193_putative.VP1 21.2 1.4
Gokush_Bourget_309_Microviridae_AG0288_putative.VP1 21.2 1.4
Gokush_Bourget_332_Microviridae_AG0407_putative.VP1 21.2 1.4
> Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.protein
Length=66
Score = 32.7 bits (73), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 29/53 (55%), Gaps = 1/53 (2%)
Query 1 MAATNWTVIRRNKKSGAIVMTNLEAKWTYKIALGIATESNINETHELICVVET 53
MAAT +T I + +G I+ + TYKIA A N E +L+CVVE+
Sbjct 1 MAATKFTAIYADN-NGKIIEREIPGMNTYKIAEKFAKMLNDPEETKLVCVVES 52
> Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.protein
Length=73
Score = 32.7 bits (73), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 29/53 (55%), Gaps = 1/53 (2%)
Query 1 MAATNWTVIRRNKKSGAIVMTNLEAKWTYKIALGIATESNINETHELICVVET 53
MAAT +T I N + G I+ + +YKIA A N E +L+CV+ET
Sbjct 1 MAATKFTAIYINNE-GKIIKREIPGMNSYKIAEKFAMMLNDPEETKLVCVIET 52
> Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.protein
Length=66
Score = 32.3 bits (72), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 29/53 (55%), Gaps = 1/53 (2%)
Query 1 MAATNWTVIRRNKKSGAIVMTNLEAKWTYKIALGIATESNINETHELICVVET 53
MAAT +T I N + G I+ + TYKIA A N E +L+CV+E+
Sbjct 1 MAATKFTAIYVNNE-GKIIEREIPGMNTYKIAEKFAIMLNDPEETKLVCVIES 52
> Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.protein
Length=73
Score = 31.6 bits (70), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/53 (40%), Positives = 28/53 (53%), Gaps = 1/53 (2%)
Query 1 MAATNWTVIRRNKKSGAIVMTNLEAKWTYKIALGIATESNINETHELICVVET 53
MAAT +T I N G I+ + TYKIA A N + +L+CVVE+
Sbjct 1 MAATKFTAIYVNN-EGKIIEREIPGMNTYKIAEKFAMMLNDPKETKLVCVVES 52
> Gokush_Bourget_224_Microviridae_AG0245_putative.VP1
Length=536
Score = 22.7 bits (47), Expect = 0.35, Method: Composition-based stats.
Identities = 7/13 (54%), Positives = 12/13 (92%), Gaps = 0/13 (0%)
Query 2 AATNWTVIRRNKK 14
A+TN+T++RR K+
Sbjct 183 ASTNYTILRRGKR 195
> Gokush_Bourget_164_Microviridae_AG044_putative.VP1
Length=540
Score = 22.3 bits (46), Expect = 0.52, Method: Composition-based stats.
Identities = 7/12 (58%), Positives = 11/12 (92%), Gaps = 0/12 (0%)
Query 3 ATNWTVIRRNKK 14
ATN+T++RR K+
Sbjct 184 ATNYTILRRGKR 195
> Gokush_Bourget_154_Microviridae_AG0430_putative.VP1
Length=540
Score = 21.9 bits (45), Expect = 0.67, Method: Composition-based stats.
Identities = 7/13 (54%), Positives = 11/13 (85%), Gaps = 0/13 (0%)
Query 2 AATNWTVIRRNKK 14
AATN+ ++RR K+
Sbjct 183 AATNYAILRRGKR 195
> Gokush_Bourget_052_Microviridae_AG0193_putative.VP1
Length=528
Score = 21.2 bits (43), Expect = 1.4, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 11/12 (92%), Gaps = 0/12 (0%)
Query 3 ATNWTVIRRNKK 14
+TN+T++RR K+
Sbjct 184 STNYTILRRGKR 195
> Gokush_Bourget_309_Microviridae_AG0288_putative.VP1
Length=536
Score = 21.2 bits (43), Expect = 1.4, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 11/12 (92%), Gaps = 0/12 (0%)
Query 3 ATNWTVIRRNKK 14
+TN+T++RR K+
Sbjct 184 STNYTILRRGKR 195
> Gokush_Bourget_332_Microviridae_AG0407_putative.VP1
Length=568
Score = 21.2 bits (43), Expect = 1.4, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 11/12 (92%), Gaps = 0/12 (0%)
Query 3 ATNWTVIRRNKK 14
+TN+T++RR K+
Sbjct 203 STNYTILRRGKR 214
Lambda K H a alpha
0.315 0.125 0.366 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3733230