bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Microviridae_proteins.fasta 575 sequences; 147,441 total letters Query= Contig-14_CDS_annotation_glimmer3.pl_2_6 Length=489 Score E Sequences producing significant alignments: (Bits) Value Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4 333 3e-109 Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4 179 2e-51 Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4 177 1e-50 Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4 148 1e-40 Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4 131 6e-35 Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4 130 8e-35 Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4 127 1e-33 Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4 126 3e-33 Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4 116 1e-29 Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4 114 5e-29 > Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4 Length=546 Score = 333 bits (854), Expect = 3e-109, Method: Compositional matrix adjust. Identities = 202/498 (41%), Positives = 283/498 (57%), Gaps = 54/498 (11%) Query 1 VPKCQIFKVHPDDPDSTLYELVVKPRRRGDykmvqkvyskkykkvikkEVDAPLSYTDDF 60 VPKC+I+ ++ Y LVVKPR + Y+ ++ LSY DDF Sbjct 74 VPKCKIYSNGDNN-----YVLVVKPRVKD---------YFYYETSDGQKRLKGLSYDDDF 119 Query 61 SYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYE 120 F A ++YI +F++QA L+V G YPHL+D YGY+SRKD QLF+KR+RK I + E Sbjct 120 RVEFKADKDYIENFKKQANLDVKGCYPHLKDMYGYLSRKDCQLFMKRVRKQIRNYTD--E 177 Query 121 KVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYV 180 K+H Y+V EY P HFRPHFHIL F +S+ ++++ G IV S WKFG DWS SRGDAESYV Sbjct 178 KIHTYIVGEYSPKHFRPHFHILFFFNSNELSQSFGSIVRSCWKFGLVDWSQSRGDAESYV 237 Query 181 AGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPL-SPFL 239 AGYVNSF+RLPYHL ++ P+ RFSN F+ SCF DAK+ +RDS ++TP+ +PFL Sbjct 238 AGYVNSFARLPYHLGSSPKIAPFGRFSNHFSESCFDDAKQTLRDSFFG--QKTPVFAPFL 295 Query 240 NGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRD 299 NGV +L+NGKLL RP RS VDSCF R A +GRLSSHEL L+R+V + + + RD Sbjct 296 NGVTNLVNGKLLLTRPSRSCVDSCFFRKARDGRLSSHELLHLIRAVCHVVEQGKRFFARD 355 Query 300 NPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQLYTCYYYAR--LESPTTDVRSDDLFD 357 + T ++ R +++ S + E LS+ ++L T YY+R L D ++ D+ + Sbjct 356 GLNYTFLNHARFIVKACKSFRYQKREKLLSLPSRLVTLLYYSRVDLTKDIQDYKNPDVDE 415 Query 358 SDCMRLYRLFSCVGKFISFWDITPSSSYEYIYRTVDLSKWYYSRLSYHMLRSQYTdlvgl 417 + +YR+ +F+ FW I +E I R +D+ + YY L Y LR ++ Sbjct 416 AMAQSIYRVLLYTMRFVRFWKIDKMPYHEGI-RLLDMCREYYRLLDYQYLRQRFQ----- 469 Query 418 vdldeelvdFLIAPVTEDT------PSSNGVSALEHHPPFESLVKSHPILSLAQAKAKTD 471 + ED P+ N L ++V SL + + Sbjct 470 ----------FLEQCEEDLLDFYLHPTENFADYLP-----RTIVTGINQYSLERYQKA-- 512 Query 472 CDNRVKHREINERNLKYV 489 +KHREIN+ NL+YV Sbjct 513 ----IKHREINDLNLQYV 526 > Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4 Length=532 Score = 179 bits (454), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 100/235 (43%), Positives = 145/235 (62%), Gaps = 10/235 (4%) Query 61 SYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYE 120 S+ F+ + +Y + ++A L+ +GKYP L D Y+ D L++KR+RK+I K G E Sbjct 125 SFSFSVNRDYWTSYAQKANLSFDGKYPALSDRIPYLLHDDVSLYMKRVRKYISKL-GINE 183 Query 121 KVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYV 180 +H Y+V EYGPV FRPHFH+LLF +SD +A++I RI S W+FGR D SASRGDAE YV Sbjct 184 TIHTYVVGEYGPVTFRPHFHLLLFFNSDELAQSIVRIARSCWRFGRVDCSASRGDAEDYV 243 Query 181 AGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLN 240 + Y+NSFS +P H+++ ++P++RFSN F S F + +++ + S +E LN Sbjct 244 SSYLNSFSSIPLHIQEIRAIRPFARFSNKFGFSFF---ESSIKKAQSGDFDE-----ILN 295 Query 241 GVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSR-SFQ 294 G NG I P R+++D+CF R A R HEL ++R V R +FQ Sbjct 296 GKSLPYNGFNTTIFPWRAIIDTCFYRPALRRRSDIHELTEILRYVRNFKQRPAFQ 350 Score = 23.1 bits (48), Expect = 5.6, Method: Compositional matrix adjust. Identities = 9/22 (41%), Positives = 14/22 (64%), Gaps = 0/22 (0%) Query 462 SLAQAKAKTDCDNRVKHREINE 483 +L + K + R+KHREIN+ Sbjct 495 NLCRDKLHNEIRKRIKHREIND 516 > Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4 Length=532 Score = 177 bits (449), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 138/223 (62%), Gaps = 9/223 (4%) Query 61 SYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYE 120 S+ F+ + +Y + ++A L+ NGKYP L Y+ D L++KR+RK+I K G E Sbjct 125 SFSFSVNRDYWTSYAQKANLSFNGKYPALSGRIPYLLHGDVSLYMKRVRKYISKL-GINE 183 Query 121 KVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYV 180 +H Y+V EYGP FRPHFH+LLF DSD +A+NI RI +S W+FGR D SASRGDAE YV Sbjct 184 TIHTYIVGEYGPSSFRPHFHLLLFFDSDELAQNIIRIASSCWRFGRVDCSASRGDAEDYV 243 Query 181 AGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLN 240 + Y+NSFS +P H+++ ++P++RFSN F S F + +++ + S +E LN Sbjct 244 SSYLNSFSSIPLHIQEIRAIRPFARFSNKFGYSFF---ESSIKKAQSGNFDEI-----LN 295 Query 241 GVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVR 283 G NG I P R+++D+CF R A HEL ++R Sbjct 296 GKSLPYNGFDTTIFPWRAIIDTCFYRPALRRHSDIHELTEILR 338 Score = 24.6 bits (52), Expect = 1.8, Method: Compositional matrix adjust. Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 0/22 (0%) Query 462 SLAQAKAKTDCDNRVKHREINE 483 SL + K ++ R+KHREIN+ Sbjct 495 SLCRDKLHSEIRKRIKHREIND 516 > Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4 Length=563 Score = 148 bits (374), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 12/227 (5%) Query 69 EYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVS 128 E +++ + NG +P + Y++ +D QLF KRLRK++ K GKYEK+H Y+VS Sbjct 183 EIAESLKKKNNTDANGAFPQFKGLLKYVNIRDYQLFAKRLRKYLSKKVGKYEKIHSYVVS 242 Query 129 EYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFS 188 EY P FRPHFHIL F DSD +AKN + V SW+ GR D +R A SYV+ Y+NS Sbjct 243 EYSPKTFRPHFHILFFFDSDEIAKNFRQAVYQSWRLGRVDTQLAREQANSYVSNYLNSVV 302 Query 189 RLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLING 248 +P+ K ++P SRFSN F F + KE +R + + + +G+ + N Sbjct 303 SIPFVYKAKKSIRPRSRFSNLFG---FEEVKEGIRKA------QDKRAALFDGLSYISNQ 353 Query 249 KLLAIRPPRSVVDSCFLRYA-CNGRL--SSHELYWLVRSVSTTLSRS 292 K + P S++D F R+ +G S ++Y +V+ + +R+ Sbjct 354 KFVRYVPSGSLIDRLFPRFTYYDGSFLRRSSQIYGVVQQILRLFARN 400 > Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4 Length=547 Score = 131 bits (329), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 120/432 (28%), Positives = 187/432 (43%), Gaps = 39/432 (9%) Query 67 SEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYL 126 SEE R F + L NGKYP +D + Y+SR D LF+KRLR K G+ +H Y+ Sbjct 136 SEEEYRLFVRKVNLTANGKYPMYKDCFPYLSRYDVALFMKRLRNLFLKKYGQSIYMHSYI 195 Query 127 VSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNS 186 V EYGPVHFRPH+HI++ ++ R A+++ V+ +W FG G+ SYVA YVNS Sbjct 196 VGEYGPVHFRPHYHIIISSNDPRFAESLEHFVDKAWFFGGASAEIPDGNCASYVASYVNS 255 Query 187 FSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLI 246 LP ++ V+P+SR GF F + R I NG I Sbjct 256 SVSLPVLFRKHRLVRPFSRKCRGFLMERFAPDSLPFGERTDRDI---------NGTLCSI 306 Query 247 NGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRDNPDATLM 306 + P RS D + R GR +L +VS ++R F+T+ + T Sbjct 307 GDASFQLYPRRSYRDRVYPRLFKVGRFDLDQLL----TVSRIITRIFRTICKQGRQRTAA 362 Query 307 DVCRLHLRSIYSMSSRSVEDFLSIENQLYTCYYYARLESPTTDVRS--DDLFDSDCMRLY 364 ++ R LR + + E L Y+ + P R+ LF+ R Y Sbjct 363 ELARSILRYVQFGRDPNTE-------VLRQFIYFNETDIPLARSRATRQMLFN----RSY 411 Query 365 RLFSCVGKFISFWDITPSSSYEYIYRTVDLS----KWYYSRLSYHMLRSQYTdlvglvdl 420 R+ + FW + + R ++L+ YYS Y L +QY D++ +D Sbjct 412 RIAYNYCSLVRFWTSCDICGFGFD-REIELAIRNVNRYYSETEYRYLVNQYEDILRFIDS 470 Query 421 deelvdFLIAPVTEDTPSSNGVSALEHHP-------PFESLVKSHPILSLAQAKAKTDCD 473 + + + D V + +H P S +K++ ++ + Sbjct 471 EFYRGEVDDLLMYYDRSPGRFVVSKQHRKVSMSDTFPV-STIKTNRLVQAVDEECHCRIQ 529 Query 474 NRVKHREINERN 485 N +KH+E+N+ N Sbjct 530 NSIKHKELNDLN 541 > Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4 Length=539 Score = 130 bits (328), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 119/410 (29%), Positives = 187/410 (46%), Gaps = 42/410 (10%) Query 87 PHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTD 146 P+++ GY++ D QLF KRL ++I + EK++ Y+V EYGP FRPHFHILLF D Sbjct 149 PYMEGLVGYLNYHDIQLFFKRLNQNIRRITN--EKIYYYVVGEYGPTTFRPHFHILLFHD 206 Query 147 SDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRF 206 S ++ ++I + V+ SW+FG D A YVAGYVNS + LP K +KP+ RF Sbjct 207 SRKLRESIRQFVSKSWRFGDSDTQPVWSSASCYVAGYVNSTACLPDFFKNSRHIKPFGRF 266 Query 207 SNGFATSCFFDAKEAVRDSISRPIE-ETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFL 265 S FA S F + + +P E E S F +G +NGK +RP RS ++ + Sbjct 267 SVNFAESAF--------NEVFKPEENEEIFSLFYDGRVLNLNGKPTIVRPKRSHINRLYP 318 Query 266 RYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHL-RSIYSMSSRSV 324 R S H +++ +SR Q V + + +V L + +Y + R + Sbjct 319 RLD----KSKHATVVDDIRIASVVSRLPQVVAK---FGFIDEVSDFELSKRVYYLIRRHL 371 Query 325 EDFLSIE---NQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFISFWDITP 381 E S++ ++L Y RL + + D +S C +YRL + W P Sbjct 372 EVDCSLDYASDELRVIYNACRL---SLYINFSD--ESGCAAIYRLLLQYRNLVKNWITAP 426 Query 382 SSSYEY---IYRTVDLSKWYY---SRLSYHMLRSQYTdlvglvdldeelvdFLIAPVTED 435 S + ++R V +Y SR S H + + L + P+T+ Sbjct 427 VGSVAFTGQLHRAVRAIHSFYDYCSRRSLHDQLVKVEKWSNDSYVRANLSIYYFYPLTD- 485 Query 436 TPSSNGVSALEHHPPFESLVKSHPILSLAQAKAKTDCDNRVKHREINERN 485 V + F +V +L + A D R+KH+ +N++N Sbjct 486 ------VDIM--MKSFSEIVFDSQVLRASYADYAADNRERIKHKALNDKN 527 > Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4 Length=536 Score = 127 bits (318), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 103/178 (58%), Gaps = 11/178 (6%) Query 85 KYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLF 144 KYP++ D Y++ +D QLF KR+ + I K+ EK++ Y V EYGP FRPHFH+L F Sbjct 146 KYPNMGDLLPYLNYRDVQLFHKRINQQIKKYTD--EKIYSYTVGEYGPKTFRPHFHLLFF 203 Query 145 TDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYS 204 DS+R+A+ G++V+ +W+FG D A SYVAGY+NS LP + + ++ P+ Sbjct 204 FDSERLAQVFGQLVDKAWRFGNSDTQRVWSSASSYVAGYLNSSHCLPEFYRCNRKIAPFG 263 Query 205 RFSNGFATSCFFDAKEAVRDSISRPIE-ETPLSPFLNGVPSLINGKLLAIRPPRSVVD 261 RFS FA F +A +P E E F+NG+ + GK RP RS+++ Sbjct 264 RFSQYFAERPFIEA--------FKPEENEKVFDKFVNGIYLSLGGKPTLCRPKRSLIN 313 > Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4 Length=559 Score = 126 bits (317), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/285 (32%), Positives = 141/285 (49%), Gaps = 12/285 (4%) Query 95 YISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNI 154 +++ D Q ++KRLRK++F+ GKYE H Y V EYGPVHFRPH+H+LLFT+SD+V++ + Sbjct 182 FLNYVDVQNYIKRLRKYLFQQLGKYETFHFYAVGEYGPVHFRPHYHLLLFTNSDKVSEVL 241 Query 155 GRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSC 214 + SWK GR D+ S G A SYVA YVNS P + +P SR S GF Sbjct 242 RYCHDKSWKLGRSDFQRSAGGAGSYVASYVNSLCSAPLLYRSCRAFRPKSRASVGF---- 297 Query 215 FFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLS 274 F + V D E + +NG NG + PP S + + R++ Sbjct 298 FEKGCDFVEDDDPYAQIEQKIDSVVNGRVYNFNGVSVRSTPPLSYIRTLLPRFSSARNDD 357 Query 275 SHELYWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQL 334 + ++ +V +T R + D +++ + R + + + V L+ +++L Sbjct 358 GIAIARILYAVHSTPKRIARFGFADYKQDSILSLVRTYYQYL------KVNPILTDDDKL 411 Query 335 YTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFISFWDI 379 + +R + + SD +S +LYRLF V KF W + Sbjct 412 --ILHASRCLTRFVNCSSDVDIESYINKLYRLFLYVYKFFRNWHL 454 > Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4 Length=562 Score = 116 bits (290), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/320 (31%), Positives = 151/320 (47%), Gaps = 39/320 (12%) Query 74 FREQATLNVNGKYPH-LQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGP 132 + + L++ GK H + + YI +D LF+KRLR + EK+ Y VSEYGP Sbjct 143 MKPKELLSILGKINHNVPNRIPYICNRDLDLFLKRLRSYYLD-----EKLRYYAVSEYGP 197 Query 133 VHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLP- 191 FRPH+H+LLF++S+R ++ + V+ +W +GRCD S SRG A YVA YVNSF LP Sbjct 198 TSFRPHWHLLLFSNSERFSRTVCENVSKAWSYGRCDASLSRGFAAPYVASYVNSFVALPD 257 Query 192 YHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLL 251 ++ + V+P S S GF S F K V + ++E LNGV +G Sbjct 258 FYTQMPKVVRPKSFHSIGFTESNLFPRKVRVAE-----VDEI-TDKCLNGVRVERDGYFR 311 Query 252 AIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRD--------NPDA 303 I+P + F R++ R S +Y L+ + T R ++ D + Sbjct 312 TIKPTWPYLLRLFPRFSDAIRKSPSSIYQLLFAAFTAPERVIRSGCADIGCDPFGESSKQ 371 Query 304 TLMDVCRLHLRSIYSMS-SRSVEDFLSIENQ--------LYTCYYYARLESPTTDVRSDD 354 +++ C+ +L + + S +FLS + L C Y ++ TT S Sbjct 372 SILSFCKQYLNYVDNYGKSNEHRNFLSPQASLPHSDVLILSECRLYDGVDLETTHRVS-- 429 Query 355 LFDSDCMRLYRLFSCVGKFI 374 R+YR F + KFI Sbjct 430 -------RVYRFFLGISKFI 442 > Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4 Length=565 Score = 114 bits (285), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 144/300 (48%), Gaps = 42/300 (14%) Query 95 YISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNI 154 YI +D LF+KRLR + YEK+ Y VSEYGP +RPH+H+LLF++S++ +K I Sbjct 165 YICNRDLDLFLKRLRSYY-----PYEKLRYYAVSEYGPTSYRPHWHLLLFSNSEQFSKTI 219 Query 155 GRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLP-YHLKQDDRVKPYSRFSNGFATS 213 V+ +W +GRCD S SRG A YVA YVNSF LP ++ + ++P S S GF S Sbjct 220 LENVSKAWSYGRCDASLSRGFAAPYVASYVNSFVALPSFYTEMPRFLRPKSFHSIGFTES 279 Query 214 CFFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRL 273 F K + + I+E LNGV +G ++P + F R++ R Sbjct 280 NLFPRKVRISE-----IDEV-TDKCLNGVRVERDGYFRILKPSWPYLLRLFPRFSDAIRK 333 Query 274 SSHELYWLVRSVSTTLSRSFQTVRRD--------NPDATLMDVCRLHLRSIYSMS-SRSV 324 S +Y L+ + T +R ++ D N +L+ C+ +L + + S Sbjct 334 SPSSIYQLLFAAFTAPARVIRSGCADIGCDPFVENSKQSLLSFCKQYLNYVDNHGKSNEF 393 Query 325 EDFLSIENQLYTCYYYARLESPTTDV------RSDDLFDSDCM----RLYRLFSCVGKFI 374 ++FLS L P +DV R D D + R+YR F + KFI Sbjct 394 KNFLSPHADL-----------PHSDVLILTECRLYDGVDLEAAHRLSRVYRFFLGIAKFI 442 Lambda K H a alpha 0.322 0.137 0.422 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 44219097