bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters



Query= Contig-14_CDS_annotation_glimmer3.pl_2_1

Length=83
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_C_043_Microviridae_AG0319_hypothetical....  23.9    0.12 
  Gokush_gi|19424724|ref|NP_598340.1|_hypothetical_protein_Sp-4p6...  20.0    4.7
  Alpavirinae_Human_feces_A_021_Microviridae_AG076_hypothetical.p...  18.9    6.1  
  Alpavirinae_Human_gut_30_017_Microviridae_AG0204_hypothetical.p...  19.2    9.2  


> Alpavirinae_Human_feces_C_043_Microviridae_AG0319_hypothetical.protein
Length=75

 Score = 23.9 bits (50),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (7%)

Query  26  YIVNSSDLQCFLQHHSSKFLSTPPPVIFQSVLVYDPIVFQSQLDSFRKSISKSNSLNN  83
           Y+V   D+  +L++  S    T   V+ ++VLV++P  F + L+S R      N +NN
Sbjct  22  YLVEDKDIPAYLEYERSLGNGTVQ-VLCKNVLVFNPEDFFAALESSRYP---KNPINN  75


> Gokush_gi|19424724|ref|NP_598340.1|_hypothetical_protein_Sp-4p6_[Spiroplasma_phage_4]
Length=149

 Score = 20.0 bits (40),  Expect = 4.7, Method: Compositional matrix adjust.
 Identities = 6/22 (27%), Positives = 10/22 (45%), Gaps = 0/22 (0%)

Query  30  SSDLQCFLQHHSSKFLSTPPPV  51
            +DL+  L  +   +L   PP 
Sbjct  55  GTDLRSMLDKYGDDYLELLPPA  76


> Alpavirinae_Human_feces_A_021_Microviridae_AG076_hypothetical.protein
Length=52

 Score = 18.9 bits (37),  Expect = 6.1, Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 4/40 (10%)

Query  21  KEKKFYIVNSSDLQCFLQHHSSKFLSTPPPVIFQSVLVYD  60
           K+++   VNSSD+  FL  +    L+    ++F     YD
Sbjct  13  KDQRAVFVNSSDVSDFLSDN----LTPDVVIVFSYCTGYD  48


> Alpavirinae_Human_gut_30_017_Microviridae_AG0204_hypothetical.protein.BACPLE
Length=422

 Score = 19.2 bits (38),  Expect = 9.2, Method: Composition-based stats.
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)

Query  42   SKFLSTPPPV  51
            +K LST PPV
Sbjct  380  AKVLSTAPPV  389



Lambda      K        H        a         alpha
   0.320    0.135    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3643771