bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-11_CDS_annotation_glimmer3.pl_2_2

Length=345
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_C_029_Microviridae_AG0111_putative.VP2        406   1e-142
  Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH        109   7e-29
  Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2        108   1e-28
  Alpavirinae_Human_feces_A_048_Microviridae_AG090_hypothetical.p...    106   6e-28 
  Alpavirinae_Human_feces_B_021_Microviridae_AG0370_hypothetical....    105   1e-27 
  Alpavirinae_Human_feces_B_023_Microviridae_AG0140_putative.VP2      79.7    8e-19
  Alpavirinae_Human_gut_30_040_Microviridae_AG0135_hypothetical.p...  63.5    4e-13 
  Alpavirinae_Human_gut_32_015_Microviridae_AG0210_hypothetical.p...  57.8    3e-11 
  Alpavirinae_Human_feces_A_016_Microviridae_AG006_putative.VP2       53.5    7e-10
  Alpavirinae_Human_gut_24_085_Microviridae_AG0228_hypothetical.p...  53.5    8e-10 


> Alpavirinae_Human_feces_C_029_Microviridae_AG0111_putative.VP2
Length=329

 Score =   406 bits (1043),  Expect = 1e-142, Method: Compositional matrix adjust.
 Identities = 211/309 (68%), Positives = 258/309 (83%), Gaps = 0/309 (0%)

Query  18   ANSASNQSWQRQHQLMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLI  77
            ++ A+N+ W  Q +LMEIQ   N + AK N  + K++W+YTN+ENQ +HI+ AGL+P L+
Sbjct  2    SSGAANEQWGNQLKLMEIQNRYNEQMAKNNQQRNKDLWDYTNYENQKQHIENAGLNPALM  61

Query  78   YgmggqggstqgagIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAE  137
            YGMGG GG +       GV  P D+SV MGL+ Q +G+++A+  SQ+ LN+SQA KN+AE
Sbjct  62   YGMGGGGGISANGAQGQGVTQPTDRSVEMGLKQQGLGLQLASIASQVDLNKSQAEKNKAE  121

Query  138  ANKIKGVDTEAQQATIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEE  197
            A KI GVDT AQ+ATIDNLIAQTSNEK K+GL+LGQIRVADAEEELKRN ADWTK+KA+E
Sbjct  122  AEKISGVDTRAQEATIDNLIAQTSNEKVKKGLILGQIRVADAEEELKRNMADWTKDKADE  181

Query  198  TRWNVKNLKKGIDKLTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKV  257
            TRWN+K+L+KGIDKL  EI+G++LDN LK+RTIDNKVKES+LTLQNLM EILLKGSQ+KV
Sbjct  182  TRWNIKSLQKGIDKLIEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQRKV  241

Query  258  NEEQAKAIPTRILQGWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIK  317
            NEEQAKAIP  ILQGWE+L K+GKALI QR+Q+E Y QDVINRYELGKKGLDIEEQKL+K
Sbjct  242  NEEQAKAIPAEILQGWEKLVKEGKALINQRDQIEAYVQDVINRYELGKKGLDIEEQKLVK  301

Query  318  DIVLGMLEI  326
            D++LGMLEI
Sbjct  302  DVILGMLEI  310


> Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH
Length=352

 Score =   109 bits (272),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 109/333 (33%), Positives = 174/333 (52%), Gaps = 48/333 (14%)

Query  1    MIGAIMGIGGTLMGA----LNANSASNQSWQRQHQLMEIQAELNRKNAKFNTGQAKEMWN  56
            M+G I+    + +G+    + A  A  +++ +Q +LM+ Q  LN K A+ N  +AK MW+
Sbjct  1    MLGGIIAAATSAIGSQIKGIEARDAEERAYTKQKELMDKQYALNDKMAEANQQRAKYMWD  60

Query  57   YTNFENQMKHIKEAGLSPGLIYgmggqggstqgagIANGVGLPQDQSVGMGLRAQEIGIE  116
            YTNFENQ +H+  A LSPGL YG  G GGST   G  +GVGL  +  VG G++ + +G++
Sbjct  61   YTNFENQKQHLLNANLSPGLFYGGSGAGGSTTSGGQGSGVGLGTETGVGYGIQEKALGLQ  120

Query  117  MANALSQIKLNESQANKNEAEANKIKGVDTEAQQATIDNLIAQTSNEKTKRGLLLGQIRV  176
            +A+  SQ+ LN+SQANKN AEA KI GVDT+                     L   Q ++
Sbjct  121  LASMASQVALNQSQANKNNAEAKKISGVDTQ---------------------LTESQTKL  159

Query  177  ADAEEELKRNTADWTKEKAEETRWNVKNLKKGIDKLTAEIDGVELDNNLKKRT----IDN  232
              A E L       TKE+ E   + V   ++   K+  E   + L N++ + T    ID 
Sbjct  160  NKAMENLTN-----TKEQREAADYFVALQEQS--KVFEEARAMALQNDITEATKQTQIDT  212

Query  233  KVKE---STLTLQNLMTEILLKGSQQKVNEEQAKAIPTRI-LQGWEELTKKGKALIVQRE  288
             V+    ++LT    +  I LKG       ++A  I  +I    +E +TK+  A  +Q  
Sbjct  213  VVQNYYLNSLTAFEKIAGIELKG-------QEAAYISKQIEWYSFEAITKRMSAEAMQS-  264

Query  289  QMETYAQDVINRYELGKKGLDIEEQKLIKDIVL  321
              ++ A+ V N +E+  K LD E+++++++ + 
Sbjct  265  MAKSAAERVKNDFEIAGKKLDQEQERILQNWIF  297


> Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2
Length=325

 Score =   108 bits (271),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 159/289 (55%), Gaps = 21/289 (7%)

Query  33   MEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggqggstqgagI  92
            MEIQ   N + AK N  + K++W+YTN+ENQ +HIK AGL+P L+YGMGG GG +     
Sbjct  1    MEIQNRYNEQMAKNNQQRNKDLWDYTNYENQKQHIKNAGLNPALMYGMGGGGGVSANGAQ  60

Query  93   ANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGVDTEAQQAT  152
              GV  P D+SV M L+ Q +G+++A+  SQ++LN+S A KN+ EA+KI G DT+  +  
Sbjct  61   GQGVTQPTDRSVEMKLKQQGLGLQLASIASQVELNKSLAEKNKVEADKIAGADTKVAEKQ  120

Query  153  IDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKNLKKGIDKL  212
             + L +Q+   K    L     ++ +A+E+  +  A++   +A+E        KK  +++
Sbjct  121  AEMLESQSEFNKRITKLQDSIEKLTNAQEQ--KTAAEYFYIQAQE--------KKVWEEV  170

Query  213  TAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKAIPTRILQG  272
              ++   ++  N K+  I   V E+     NLM   +   ++QK+N EQ   +  +I  G
Sbjct  171  REQVVKADVAENTKEAMIQKAVLENF----NLMQTGIESITRQKLNNEQINYLKGQIAIG  226

Query  273  WEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVL  321
            W  +    K++  + ++       + N   +G + LD ++++LIKD + 
Sbjct  227  WANVAIGEKSVSNESDR-------IANELMIGIRDLDRKDRELIKDWIY  268


> Alpavirinae_Human_feces_A_048_Microviridae_AG090_hypothetical.protein.BACPLE.00802
Length=333

 Score =   106 bits (265),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 158/290 (54%), Gaps = 22/290 (8%)

Query  32   LMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggqggstqgag  91
            LM  QAELN++ A ++T  AK  W+YTN+EN +KH+KEAGL+P L Y  GGQGG+T G  
Sbjct  9    LMNKQAELNKEQADYSTDLAKNYWDYTNYENSVKHLKEAGLNPALFYAKGGQGGATGGGQ  68

Query  92   IANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGVDTEAQQA  151
                VGLP        ++AQ +G ++ N LSQ++LN++ A K EAEA KI G DT+  + 
Sbjct  69   AQG-VGLPPTTPTMARIQAQGMGAQLQNVLSQVELNKATAKKTEAEAEKIAGADTKVAER  127

Query  152  TIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKNLKKGIDK  211
              + L +Q+   +    L     ++ +A+E+  +  A++   +A+E        KK  ++
Sbjct  128  EAEMLESQSEFNRRITRLQDSIEKLTNAQEQ--KTAAEYFYTQAQE--------KKVWEE  177

Query  212  LTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKAIPTRILQ  271
            +  +I    + +++ + T +  ++++ L   NLM   +   ++QK+N EQ   +  ++  
Sbjct  178  VREQI----VKSDVAEETKEAMIRKTGLENFNLMQAGIESITRQKLNSEQINYLRGQLAI  233

Query  272  GWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVL  321
            GW  +        +  + +   A  + N   +G K LD ++++LIKD + 
Sbjct  234  GWANVA-------IGEKSVSNEADRIANELMMGMKDLDRKDRELIKDWIY  276


> Alpavirinae_Human_feces_B_021_Microviridae_AG0370_hypothetical.protein.BACPLE.00802
Length=333

 Score =   105 bits (263),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 92/290 (32%), Positives = 156/290 (54%), Gaps = 22/290 (8%)

Query  32   LMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggqggstqgag  91
            LM  QAELN++ A ++T  AK  W+YTN+EN +KH+KEAGL+P L Y  GGQGG+T G  
Sbjct  9    LMNKQAELNKEQADYSTDLAKNYWDYTNYENSVKHLKEAGLNPALFYAKGGQGGATGGGQ  68

Query  92   IANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGVDTEAQQA  151
                VGLP        ++AQ +G ++ N LSQ++LN++ A K EAEA KI G DT+  + 
Sbjct  69   AQG-VGLPSTTPTMARIQAQGMGAQLQNVLSQVELNKATAKKTEAEAEKIAGADTKVAER  127

Query  152  TIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKNLKKGIDK  211
              + L +Q+   K    L     ++  A+E+  +  A++   +A+E        KK  ++
Sbjct  128  EAEMLESQSEFNKRVTKLQDSIEKLNKAQEQ--KTAAEYFYTQAQE--------KKVWEE  177

Query  212  LTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKAIPTRILQ  271
            +  +I    + +++ + T +  ++ + L   NLM   +   ++QK+N EQ   +  ++  
Sbjct  178  VREQI----VKSDVAEETKEAMIERAGLENFNLMQAGIESITRQKLNSEQINYLKGQLAI  233

Query  272  GWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVL  321
            GW  +        +  + +   A  + N   +G K LD ++++LIKD + 
Sbjct  234  GWANVA-------IGEKSVSNEADRIANELMMGMKDLDRKDRELIKDWIY  276


> Alpavirinae_Human_feces_B_023_Microviridae_AG0140_putative.VP2
Length=295

 Score = 79.7 bits (195),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 83/132 (63%), Gaps = 7/132 (5%)

Query  26   WQRQHQLMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggqgg  85
            W+ + + M +QA+ N++ A ++   A +MWN TN+E+Q++H+K AGL+P L+Y  GG GG
Sbjct  12   WKLEKEKMALQAKYNKEQADYSQQLALDMWNATNYESQVEHMKAAGLNPALLYSKGGAGG  71

Query  86   stqgagIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGVD  145
            ST GAG A  V     Q+VGMGL+A++I I  A  +++         K  AE  KI GVD
Sbjct  72   STSGAGTAAPVSDGTTQAVGMGLQAKQIAISQAQQMAET-------AKTVAETAKISGVD  124

Query  146  TEAQQATIDNLI  157
            TE+ + +I  ++
Sbjct  125  TESVKTSIKKML  136


> Alpavirinae_Human_gut_30_040_Microviridae_AG0135_hypothetical.protein
Length=377

 Score = 63.5 bits (153),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 60/97 (62%), Gaps = 1/97 (1%)

Query  52   KEMWNYTNFENQMKHIKEAGLSPGLIYgmggqggstqgagIA-NGVGLPQDQSVGMGLRA  110
            K+ W+YTN ENQ++H+K +GL+ GL+YG  G GG     G   +     Q   +GM L+ 
Sbjct  71   KDYWDYTNAENQVRHLKNSGLNIGLMYGQSGAGGMGASGGARQDSPDQAQGNPIGMALQV  130

Query  111  QEIGIEMANALSQIKLNESQANKNEAEANKIKGVDTE  147
            Q++  +     +QI L E+QANK  AEANKI GVDT+
Sbjct  131  QQLEQQRRMNDAQIALAEAQANKAGAEANKIAGVDTQ  167


> Alpavirinae_Human_gut_32_015_Microviridae_AG0210_hypothetical.protein
Length=341

 Score = 57.8 bits (138),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 81/301 (27%), Positives = 142/301 (47%), Gaps = 32/301 (11%)

Query  27   QRQHQ--LMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggqg  84
            QR+H+  +M +Q + N   A  N  +A EMW  T +E Q + I+ AGL+  L+YG GG  
Sbjct  51   QREHEKEMMGLQYQYNEAAANNNMTRALEMWEKTGYEAQGQQIENAGLNKALMYGGGGAS  110

Query  85   gstqgagIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGV  144
             ++Q  G  +GV     Q+V MGL+A+ +  +++N  +   L  +QA K   EA+K    
Sbjct  111  ATSQSQG-NSGVNNTGTQAVAMGLQARAMEAQVSNTEADTALKIAQAAKEAGEASK----  165

Query  145  DTEAQQATIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKN  204
                    I+  I QT+ E T     L    V     E+ R+TA    +KA E       
Sbjct  166  ------KPIELKIEQTNKEITDLEKSLKAQNVEIGANEMVRSTA--IAQKAME-------  210

Query  205  LKKGIDKLTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKA  264
                      E++   ++  +KK T D  +K +   + NL  +I L  ++ K   +  +A
Sbjct  211  ----------ELNQAMMETEIKKETKDAIIKSTIKNVTNLEVQIALGIAKTKETNKNIEA  260

Query  265  IPTRILQGWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVLGML  324
            I  ++    +++  +       +E  +T  + +I   E+  + LD++E+++I D + G +
Sbjct  261  IGGQLEALKKDVITRQITAEAAKENAKTLGERLIKEMEVKGQELDLQEKRMILDAIKGGV  320

Query  325  E  325
            E
Sbjct  321  E  321


> Alpavirinae_Human_feces_A_016_Microviridae_AG006_putative.VP2
Length=367

 Score = 53.5 bits (127),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 85/304 (28%), Positives = 143/304 (47%), Gaps = 33/304 (11%)

Query  24   QSWQRQHQLMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggq  83
            ++W+ + + M +Q +  +  A     +  EMWN TNF  Q +H+++AGLS GL+YG GGQ
Sbjct  61   KAWEYEKEGMGMQYQYGQAAANEAQRRNMEMWNQTNFGAQRQHMEDAGLSVGLMYGGGGQ  120

Query  84   ggstqgagIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKG  143
            G  +QG       G P    VGM L+ ++I  +     SQ  LN+++A K  AEA K  G
Sbjct  121  GAVSQGGQATQPSG-PTSNPVGMALQYKQIEQQNEAIKSQTMLNQAEAAKALAEAKKTGG  179

Query  144  VDTEAQQATIDNLIAQTSNEKTKRGLLLGQI--RVADAEEELKRNTADWTKEKAEETRWN  201
            VDT                +KT+  +   +I  R+ ++ E++  +     K  A++T   
Sbjct  180  VDT----------------KKTESEIKWQEIENRIQESREQIASSNIIEAKANAKKT---  220

Query  202  VKNLKKGIDKLTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQ  261
            V+  K+ +  L  E     LD   ++R      + S +  Q L  E ++      +   Q
Sbjct  221  VEEFKQAM--LNTEY----LDKTQQQRIQMVTDQLSLIQKQGLKEEAVI-----DLTNAQ  269

Query  262  AKAIPTRILQGWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVL  321
            A  +   I   W +   K  +    ++Q +T    +   YELGK  L +EEQK +++ + 
Sbjct  270  ASKVRKEIDILWYDAITKRTSADALKKQADTAVDKIAKEYELGKGKLSLEEQKNLREWIY  329

Query  322  GMLE  325
            G ++
Sbjct  330  GGID  333


> Alpavirinae_Human_gut_24_085_Microviridae_AG0228_hypothetical.protein
Length=335

 Score = 53.5 bits (127),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 76/298 (26%), Positives = 141/298 (47%), Gaps = 32/298 (11%)

Query  27   QRQHQ--LMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYgmggqg  84
            QR+H+  +M +Q + N   A  N  +A EMW  T +E Q++ I+ AGL+  L+YG GG  
Sbjct  51   QREHEKEMMGLQYQYNEAAANNNMTRALEMWRKTGYEAQVQQIENAGLNEALMYGGGGAS  110

Query  85   gstqgagIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGV  144
             ++Q  G  +GV     Q+V +GL+A+ I  ++ N  +   L  +QA K   EA+K    
Sbjct  111  ATSQSQG-NSGVTNTGTQAVALGLQARAIEAQVNNTEADTALKMAQAAKEAGEASK----  165

Query  145  DTEAQQATIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKN  204
                    I+  I QT+ E            +AD E+ LK    +     A E       
Sbjct  166  ------KPIELKIEQTNKE------------IADIEKNLKAQNVEIG---ANEIVRTAAI  204

Query  205  LKKGIDKLTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKA  264
             +K +++L   +    ++  +KK T D  ++ +   + NL  +I L  ++ K   +  +A
Sbjct  205  AQKAMEELNQAM----VETEIKKETKDAIIESTIKNVTNLEVQIALGIAKTKETNKNIEA  260

Query  265  IPTRILQGWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVLG  322
            I  ++    +++  +       +E  +T  + +I   E+  + LD++E+++I + + G
Sbjct  261  IGKQLEALKKDVITRRITAEAAKENAKTLGERLIKEMEVKGQELDLQEKRMILEAIQG  318



Lambda      K        H        a         alpha
   0.310    0.128    0.345    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 29743416