bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-37_CDS_annotation_glimmer3.pl_2_1
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
enr:H650_20620 nucleotide-binding protein 33.9 3.4
xce:Xcel_1166 amidohydrolase 34.3 3.4
tap:GZ22_04925 penicillin-binding protein 33.9 3.9
oce:GU3_05930 putative nucleotide-binding protein 33.5 4.0
swi:Swit_0475 5-oxoprolinase (EC:3.5.2.9) 33.5 5.7
psx:DR96_1888 hypothetical protein 32.7 8.2
psi:S70_06835 putative nucleotide-binding protein 32.7 8.2
> enr:H650_20620 nucleotide-binding protein
Length=163
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (53%), Gaps = 9/99 (9%)
Query 4 NTKPDYKSVECNFDVRKDFERTKPNLGLTPQQV--------ADMAKRGIPVSPMNVNFID 55
T+ D+++VE F++ ++ ++T L + QV A + KRGI + ++V
Sbjct 27 GTRFDFRNVEATFELNEE-KQTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLDVPEEF 85
Query 56 VNGDASWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQ 94
V+ +W +E + ++ +D ATA ++ K + L+V Q
Sbjct 86 VHSGKTWFVEAKLKQGIDAATAKKIIKLIKDSKLKVQAQ 124
> xce:Xcel_1166 amidohydrolase
Length=373
Score = 34.3 bits (77), Expect = 3.4, Method: Composition-based stats.
Identities = 18/55 (33%), Positives = 27/55 (49%), Gaps = 2/55 (4%)
Query 30 GLTPQQVADMAKRGIPVSP--MNVNFIDVNGDASWNIEPQFRRDMDMATAWEMEK 82
G+TP Q ++A RG+PV+P + V V D + P F R + A E+
Sbjct 216 GVTPDQAVELAARGVPVTPTLLQVERFGVIADQAQERYPAFARRLRAMHARRYEQ 270
> tap:GZ22_04925 penicillin-binding protein
Length=727
Score = 33.9 bits (76), Expect = 3.9, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query 30 GLTPQQVAD----MAKRGIPVSPMNVNFI-DVNGDASWNIEPQFRRDMDMATAWEMEKAS 84
GLTP ++A+ A G + ++N I D NG+A++ EPQ TAW+M +
Sbjct 467 GLTPLKIAEGFRTFAHEGQWIESQSINAIYDRNGEAAFKAEPQTEDVFSEQTAWDMTRML 526
Query 85 Q 85
Q
Sbjct 527 Q 527
> oce:GU3_05930 putative nucleotide-binding protein
Length=160
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query 4 NTKPDYKSVECNFDVRKDFERTKPNLGLTPQQVAD-----MAKRGIPVSPMNVNFIDVNG 58
T+ D++ VE +F+++ D R + L QQ+ D + KRG+ V ++ I +G
Sbjct 27 TTRFDFRGVEASFELKDDKVRLEAEAELQLQQMRDILRGALIKRGVDVRVLDPGSIVRSG 86
Query 59 DASWNIEPQFRRDMDMATAWEMEK 82
E FR+ +D A A ++ K
Sbjct 87 KRHVQ-ELGFRQGIDTALAKKLVK 109
> swi:Swit_0475 5-oxoprolinase (EC:3.5.2.9)
Length=680
Score = 33.5 bits (75), Expect = 5.7, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 39/74 (53%), Gaps = 7/74 (9%)
Query 31 LTPQQVADMAKRGIPVSPMNVNFI----DVNGDASWNIEPQFRRDM-DMATAWEMEK--A 83
L PQ+ + RGI +S +N++F+ + DASW +M D ATAW + + A
Sbjct 468 LVPQEPGTLCARGILLSDINMDFVRSELSLAADASWRRVCAVLGEMRDEATAWLVREGVA 527
Query 84 SQRKALQVLRQKKF 97
+ + L+++ ++
Sbjct 528 EEDRQLRIMVDARY 541
> psx:DR96_1888 hypothetical protein
Length=163
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/98 (27%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query 4 NTKPDYKSVECNFDVRKDFERTK--PNLGLTPQQVAD-----MAKRGIPVSPMNVNFIDV 56
T+ D+K+V +F++ + E K Q+ D MAKRGI + +N+ V
Sbjct 27 TTRWDFKNVAASFELNEKSESIKVTSESDFQVHQLLDILREKMAKRGIDGAVLNIPDDVV 86
Query 57 NGDASWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQ 94
+ ++++E ++ +D ATA ++ K + L+V Q
Sbjct 87 HSGKTYSVEVTLKQGIDAATAKKIVKLIKDSKLKVQAQ 124
> psi:S70_06835 putative nucleotide-binding protein
Length=163
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/98 (27%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query 4 NTKPDYKSVECNFDVRKDFERTK--PNLGLTPQQVAD-----MAKRGIPVSPMNVNFIDV 56
T+ D+K+V +F++ + E K Q+ D MAKRGI + +N+ V
Sbjct 27 TTRWDFKNVAASFELNEKSESIKVTSESDFQVHQLLDILREKMAKRGIDGAVLNIPDDVV 86
Query 57 NGDASWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQ 94
+ ++++E ++ +D ATA ++ K + L+V Q
Sbjct 87 HSGKTYSVEVTLKQGIDAATAKKIVKLIKDSKLKVQAQ 124
Lambda K H a alpha
0.316 0.131 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 125230604613